Hydrogenobaculum sp. Y04AAS1: HY04AAS1_0299
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Entry
HY04AAS1_0299 CDS
T00745
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hya
Hydrogenobaculum sp. Y04AAS1
Pathway
hya03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hya00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HY04AAS1_0299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hya03019
]
HY04AAS1_0299
03009 Ribosome biogenesis [BR:
hya03009
]
HY04AAS1_0299
Enzymes [BR:
hya01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HY04AAS1_0299
Messenger RNA biogenesis [BR:
hya03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HY04AAS1_0299
Ribosome biogenesis [BR:
hya03009
]
Prokaryotic type
rRNA helicases
HY04AAS1_0299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Utp25_C
Cas3-like_C_2
AAA_19
P-loop_SecA
UvrD-helicase
CCDC113_CCDC96_CC
Motif
Other DBs
NCBI-ProteinID:
ACG56989
LinkDB
All DBs
Position
258023..259117
Genome browser
AA seq
364 aa
AA seq
DB search
MSLFSKLSLELQKALEDAGYKEPTPIQRDAIPLALEGYDILGQAATGTGKTGAFAIPIVE
KLQKGKPDVKALVLTPTRELAIQVKEQIYMLTKYKRLSSYVFYGGTSVKQNLDILQNKNV
DILIGTPGRIKDLIDRKALNLSKVEYLVLDEFDQMLDMGFIEDIEYIISFLPKERTTYMF
SATVPSRIELLAKRFLKSDFKFVKVQSVELKPNIEEKMIKLSSPGEKIHELMHIIDTHPM
EKMLIFVKTKKDAKDLFFLLTKKGIRAQALHGDLTQRQREKALSAFKSGAVSILIATDVA
ARGLDIKDVGVVINYNIPEDPELYIHRIGRTGRIGKSGKAFSLICPEDSKALWRIKKLRS
KISV
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgtcattattctcaaaacttagtttagaactacaaaaagctttggaggatgctggatac
aaagaaccaacacccattcaaagggatgctattcctttagcgttggaaggttacgatatc
ttgggacaagccgccaccgggacagggaagacaggggcctttgctataccaatagtggaa
aagcttcaaaaggggaaaccagatgtcaaagctcttgtgctgacacctaccagggagttg
gctatacaggtaaaagagcaaatatatatgcttaccaaatataaaaggctttcttcttat
gtattttacggtgggacttctgtaaaacaaaatttggatattttgcaaaataaaaacgtg
gatatcttgataggaactcctggacgtataaaagatctcatcgataggaaggctttaaat
ttgtcaaaagtagaatatcttgttttagatgaatttgatcaaatgcttgatatgggcttt
atagaagacatagaatatataataagctttttgccaaaagaaaggaccacttatatgttt
tctgccactgtaccaagccgtattgagcttttagcaaaaagatttttaaagagtgatttc
aaatttgtgaaggtacagtcggtagagttaaaaccaaacatagaagagaagatgataaag
ctatcttcacctggagaaaaaatacacgaacttatgcatataatagacacccatcctatg
gaaaaaatgttaatttttgtaaaaactaaaaaagatgcaaaagatttatttttcttgctt
acaaaaaaaggcataagagctcaagctcttcatggagatctcacacaaagacagagggaa
aaagctctaagtgcatttaaatctggtgccgttagtatattgatagctaccgatgtagcc
gccagaggtcttgatataaaagatgtaggagttgtaataaactacaacataccagaagac
ccagagctttacatacatagaataggaagaactggtagaataggcaaaagcggtaaagcg
ttctctttaatatgtccagaggactccaaagcgttgtggcgcataaagaagcttaggtca
aaaatatcggtgtaa
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