Hydrogenobaculum sp. Y04AAS1: HY04AAS1_0371
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Entry
HY04AAS1_0371 CDS
T00745
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hya
Hydrogenobaculum sp. Y04AAS1
Brite
KEGG Orthology (KO) [BR:
hya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hya03032
]
HY04AAS1_0371
03400 DNA repair and recombination proteins [BR:
hya03400
]
HY04AAS1_0371
Enzymes [BR:
hya01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HY04AAS1_0371
DNA replication proteins [BR:
hya03032
]
Prokaryotic type
DNA Topoisomerases
HY04AAS1_0371
DNA repair and recombination proteins [BR:
hya03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HY04AAS1_0371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ACG57061
LinkDB
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Position
325358..327658
Genome browser
AA seq
766 aa
AA seq
DB search
MEILEIPIEEEARQSYLDYAMSVIVGRAIPDVRDGLKPVQRRILYAMYEMDLTPDKPFKK
CARIVGDTMGRYHPHGDQAIYDALVRMAQDFNLRYPLVIGQGNFGSIDGDPPAAMRYTEA
KLSKITLSLLEDIENDTVDFVPNFDESVMEPQVLPAKMPNLLCNGTTGIAVGLATSIPPH
NLKEVCDALVALAQNQDITVEELMQYIKGPDFPTGGIIVGEVSPEVYKTGRGQVTVQAKA
RVEKTSSGREQIIITEIPYMVNKAELIKKIAELARSGKLKEISDLRDESDKEGIRIVIEL
KRDAKGEAVLKKLYKNTSLRKNFPINMVALVGLEPKLLNLKDILLEFFKHRLNVIYRRTE
FFLRKAEERLHIVEGLLICIKDIDKIIETIRASQDTQEAKEKLMSGWNLTEKQAQAILDL
RLQRLTSLETSKLQKEHDELIENIKTYKNILENKQERINIFIKETKELADRFKDPRRTFI
EGMIKEDTYVDVFVTRNGFVKPIELLEEEKSPIVNVASLKFTEGLFIVSNKGRVYWTAGS
EALSGSSIHMKDTDEHVVGAFVREQYNSRLLILTNKGSIKKIPLVEFEYKTQGFQILKLS
EGEEVVYISGSQDESEILILTKKGYINRIQTQDVGATTSSSKAIQCIKLNENDEAISVRA
LDDKIFGLLITEEGYAKKIKLEDIPKKSRTSQGINVLKQKFLNACDLIFYNDDDNFDVLI
STFNGSHIKFDIKSLIQRIKVPAGIGVPEEKVIDLKDDKIYKVVSL
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggaaatattggaaatccctatagaagaagaggcaagacaatcttatcttgactatgcg
atgtctgttatagttggtagggctataccagacgttagagatggccttaagccggttcaa
agaagaatactgtatgcaatgtatgaaatggacctaaccccagataaaccctttaaaaaa
tgtgcccgtatcgtaggggatactatgggaagatatcatccccatggagatcaagctata
tacgatgctcttgtaagaatggctcaggatttcaaccttagatatcctcttgtaatagga
cagggaaattttggttctatagatggagaccctcctgctgcaatgagatatacagaggca
aagctatctaagataacccttagcttattggaagatatagaaaacgatactgtagatttt
gtaccaaattttgatgagagtgtcatggagcctcaggttcttccggcaaagatgccaaac
cttctttgcaacggtactacaggcatagcggtagggcttgctacttctatcccccctcac
aatctaaaagaagtttgcgatgcgttggtggctttggctcaaaaccaagatataactgta
gaagagcttatgcaatatataaaaggaccagattttcccacaggcggtataatagtgggg
gaagtatcgccagaggtttacaaaaccggaagaggacaagttactgttcaagcaaaggca
agagtagaaaaaacaagctctggaagagaacaaataataataacagaaatcccttacatg
gtcaacaaagcagagcttataaaaaagatagcagaactagcaaggtctggtaagctaaaa
gagatttctgacttaagagacgaatctgacaaagaaggtataagaatagtaatagaacta
aagagagatgctaaaggagaggctgtattaaaaaaactttacaaaaatacatcccttaga
aaaaactttcctataaatatggtggctttggtgggacttgaaccaaagcttttaaatcta
aaagatattttgctggaatttttcaaacataggctaaatgtgatctatagaaggactgag
tttttcttaagaaaagccgaagaaagacttcatatagtagaaggacttttgatttgtata
aaagatatagacaaaattatagaaaccattagagcttcacaagacacccaagaggctaaa
gaaaagctcatgagtggctggaatctaactgaaaagcaagctcaagcaatacttgattta
agattacaaagacttacatccttagaaacttctaagcttcaaaaagaacacgatgagctt
atagaaaatatcaagacttataaaaatatattggaaaacaaacaagaaaggataaacatc
tttataaaagagacaaaagaacttgcagatcgtttcaaagacccaagaagaactttcatc
gaaggtatgataaaagaagatacctatgtggatgtttttgtcacgagaaatggatttgta
aaacctatagagcttttagaagaggaaaaatctcctattgttaatgtggcaagtttgaag
tttacagaaggccttttcatagtatcaaataaaggaagagtttattggactgctgggtca
gaagctttgtctggaagctccattcatatgaaggataccgacgagcacgttgtaggtgcc
tttgtgagagagcaatacaactcaagacttcttatcttgacaaataaaggctctataaag
aagatacctcttgtggagtttgaatacaaaacccaaggctttcaaatattgaagctctca
gaaggtgaagaggtggtttatataagcggttctcaagatgagagcgaaatacttatttta
accaagaaaggttatataaatagaattcaaacccaggatgtaggagcaaccacatctagc
tcaaaagccattcaatgtataaagcttaatgaaaatgatgaggctatctcggtgagagct
ttagatgacaagatttttgggcttttgataacagaagaaggatacgctaaaaagataaag
ctagaggatattccaaaaaaatctagaacatctcaaggtataaacgtattaaagcaaaag
tttttaaacgcttgcgatttgatattttacaacgatgacgataattttgatgtgttgata
tccacttttaacggctctcatataaaatttgatattaaaagcctaatacagcgtataaaa
gtacctgctggtataggcgtgcctgaggaaaaagttatcgatttaaaagacgacaagata
tataaggtggtatcattatga
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