Hydrogenobaculum sp. Y04AAS1: HY04AAS1_0828
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Entry
HY04AAS1_0828 CDS
T00745
Name
(GenBank) DNA polymerase III delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
hya
Hydrogenobaculum sp. Y04AAS1
Pathway
hya03030
DNA replication
hya03430
Mismatch repair
hya03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HY04AAS1_0828
03430 Mismatch repair
HY04AAS1_0828
03440 Homologous recombination
HY04AAS1_0828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hya03032
]
HY04AAS1_0828
03400 DNA repair and recombination proteins [BR:
hya03400
]
HY04AAS1_0828
Enzymes [BR:
hya01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HY04AAS1_0828
DNA replication proteins [BR:
hya03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HY04AAS1_0828
DNA repair and recombination proteins [BR:
hya03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HY04AAS1_0828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
BLOC1S3
DNA_pol3_delt_C
DUF6475
DUF5830
DUF3979
Motif
Other DBs
NCBI-ProteinID:
ACG57515
LinkDB
All DBs
Position
complement(771371..772342)
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AA seq
323 aa
AA seq
DB search
MLDVLEYIKKDNSLDNLTHTVVYGKDIYFIQYFEQLIKQKYDTKTYWADELDYENLRNII
TSRNIFNKKIVIIIKNFTELLNKLKKENLDFIKKTQNIIIFEEYEDLTEKDIKAVQIILG
DINILTSKQKKPDYLKSLIQKKFKKEGIDLNQDIINELLDTIGTDSLNLKNETDKLLVLA
KSVPITRETLSRALVKEPKDEAFSIVDALIKQDIKKALSIFYDNIKLGQHPLVTLGFMQK
QFINMYLAFKMNVSFDEVCKILNISHPFQKNILSKQLSIVNKDKLFSIVKALQRADMSIK
YYFNDPVEVLEKLIINIGLILKS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatgttttggagtatataaaaaaagataacagtctagacaacttaacgcatact
gttgtatatggaaaagatatatattttatccaatattttgaacagcttataaaacaaaaa
tacgatacaaaaacatattgggcagacgaacttgattatgaaaatttaagaaatataatc
acttctaggaatatttttaacaaaaaaatagttattataataaaaaattttacggaactc
ttaaacaaattaaaaaaagaaaatttggattttataaaaaaaactcaaaacataattata
tttgaggagtacgaagatctaacagaaaaagatataaaagccgttcaaatcattcttgga
gatataaatatattaacatcaaagcaaaaaaaacccgattatcttaaaagccttatacag
aaaaaattcaaaaaagaaggcattgacttaaaccaagacataataaatgaattgttagat
acaataggtacagattctttaaacctaaaaaatgaaacggataagcttcttgtattggca
aaatctgtaccaattacaagagaaacactttcaagagctcttgtaaaagaaccaaaagat
gaagcgttttctatcgtagatgctttgataaaacaagatataaagaaagcgctatctatc
ttttacgataatatcaagttgggtcaacatccattggtaactcttgggtttatgcaaaaa
caatttataaatatgtatttggcttttaagatgaatgtaagttttgatgaggtatgtaag
attttaaatataagtcatccgtttcagaaaaacatattatcaaaacagttaagtatcgtt
aataaggataagctttttagtattgtaaaggctcttcaaagagccgatatgagcataaaa
tattattttaacgatccagtggaagttttggaaaagcttatcataaatattgggttaata
ttaaaatcatga
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