Hydrogenobaculum sp. Y04AAS1: HY04AAS1_0927
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Entry
HY04AAS1_0927 CDS
T00745
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hya
Hydrogenobaculum sp. Y04AAS1
Brite
KEGG Orthology (KO) [BR:
hya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hya03016
]
HY04AAS1_0927
Enzymes [BR:
hya01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HY04AAS1_0927
Transfer RNA biogenesis [BR:
hya03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HY04AAS1_0927
Prokaryotic type
HY04AAS1_0927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PSA_CBD
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
ACG57614
LinkDB
All DBs
Position
complement(874553..875404)
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AA seq
283 aa
AA seq
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MDGFYIGYKPVGISSSKFVLDISKSLNTKAGHTGTLDLEAEGIMIIALGQATKYTQYFNV
LPKIYETKGMLGIKTDTQDISGNVIQKIEDVNITCEELKSTIEKFKGKITQIPPIYSAKK
INGKKAYKLARKNQVQSIELKPITVNVYSIELLECNIPEFYTKAVVSTGTYIRTLINDIG
DTLKVGATTLIIKRTAVGKFGNESVGKIYSIEDGLYFIPSLLLKDDIVRRLKHGKVIKYE
AKDGVYKLLSEDGMFHGVVEVKDNVLKALRMQSQEDKNHIDKI
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggatggtttttatataggctataagccggttggtatatcatcttcaaaatttgtgctt
gatatatctaaaagcctaaatacaaaagcaggacatactggtacgcttgatttagaagca
gaaggtataatgataatagctcttgggcaagccaccaagtatacgcaatacttcaatgtg
ctcccaaaaatttacgagacaaaaggtatgcttggtataaaaacagacacccaggatatc
tcaggaaatgttattcagaaaatagaagatgtaaatataacctgtgaagagctaaaaagc
accattgaaaaattcaaaggcaaaataacccaaataccccccatctactccgctaaaaag
ataaacggtaaaaaagcttacaaattagcaagaaaaaaccaagtccaaagcatagagcta
aaacctataacggtgaatgtttacagtattgagcttttagaatgcaacatacctgagttt
tatacaaaagctgttgtttcaacggggacttacataaggacgttgataaacgatatagga
gatactctaaaagtgggtgctactacgcttattataaagcgtaccgccgtaggtaaattt
ggcaatgaaagcgtaggtaagatttattctattgaagatggtctttattttataccgtct
ttactattaaaagatgatatcgttaggcgtttaaagcatggtaaagtaataaaatatgaa
gcaaaagacggcgtatataaacttttatcggaagatggaatgtttcacggcgttgtagag
gtaaaagataatgttctaaaagctttaagaatgcaaagccaagaagataaaaatcatatt
gacaaaatataa
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