Hydrogenobaculum sp. Y04AAS1: HY04AAS1_1003
Help
Entry
HY04AAS1_1003 CDS
T00745
Name
(GenBank) ABC transporter related
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
hya
Hydrogenobaculum sp. Y04AAS1
Pathway
hya02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hya00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HY04AAS1_1003
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hya02000
]
HY04AAS1_1003
Enzymes [BR:
hya01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
HY04AAS1_1003
Transporters [BR:
hya02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
HY04AAS1_1003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_29
nSTAND3
AAA_18
AAA_23
Rad17
RsgA_GTPase
MMR_HSR1
AAA
MeaB
ATP-synt_ab
DUF6483
AAA_15
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ACG57689
LinkDB
All DBs
Position
938682..940379
Genome browser
AA seq
565 aa
AA seq
DB search
MEQIKWLLSNLKPYWAFVSLVIFGSILEGLGTSFMTYLVKRIMDDVFILKESNKLYMILY
LFAAAAVVIQIGFFLRNFLMNMVSEKLLMDFREKMFSSLLYSKVDFFINHPSGDIISRFN
NDINAIKNILIDYMLSLIKEPITVLLLLGVLIYRDIYLTIIIIFAFPIISYSVKYFGTKR
AKYVKLNQERLGIINQHVTQLISGIENIKIFGAENKFLERFVQANKNLFKAGIKTIFYTV
MNSIFNQSTGYIVFGLVLLYGGYRIVHGYTSAGNFISYITALLLIQMPIMETQKGFMNMR
SSIPLVKRVQEMLLLQKEKDGTINIGNLLVPIVMKNVYVTIDSKEILKDINLTINPGEKI
GIVGPTGAGKSTLLDILPKLVSYKGDVYIKDKSLEDITNKSIRSKIAFASQHVFIFNDTV
RNNLLIANPNASEELLIKAIKLAKAEFLFTLKNGLDTVLGEYGYTVSGGERQRIAIARIF
LTNPDIILLDEITSALDVHTEQAVISNIFEVFKDKTILIVAHRLSNIINCDRILYIEDGR
ILEEGTFEELMRKQGNFYTLYQKSR
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaatcaaatggcttctatctaacttaaaaccctattgggcgtttgtaagcctt
gttatatttggctccattttagaagggcttggcacgtctttcatgacataccttgttaaa
agaataatggatgatgtattcatattaaaagaatcaaacaagctttacatgatactatat
ctttttgcagcggcggctgttgtcatccaaattggatttttcttaaggaacttcctcatg
aatatggtatcagaaaaactcctaatggatttcagagaaaagatgttttcatcgctcctt
tattcaaaagtagattttttcataaatcacccaagcggcgatataataagtagattcaac
aacgatataaacgcaataaaaaacatacttatagactatatgctatccctcataaaagaa
cccattacagttcttttgcttttaggtgttttaatatatagagatatatacctaaccatt
ataataatctttgcttttcccatcatatcttattcggtaaaatactttggaacaaaaaga
gctaaatatgtaaaactgaaccaagaaaggttgggtatcataaatcaacatgtaacgcaa
ctcataagcggcatagaaaacataaaaatatttggagctgaaaacaaatttttggaacgc
tttgtccaagcaaataaaaatttatttaaagctggtataaaaaccatattttacacagta
atgaactcaatattcaatcaatctactggttatatagtttttggtttggtgcttttatat
ggaggttatagaatagtccatggttatactagcgctgggaattttatctcctatataact
gcattattgctcatacaaatgcccatcatggaaactcaaaaaggctttatgaatatgcgc
tcctcaatcccacttgtaaaaagggttcaagagatgctcttgctccaaaaagaaaaagat
ggcactataaatataggcaatctcttagtacccattgtcatgaaaaatgtatatgtaaca
atagattctaaggaaattctcaaagatataaatctaactataaacccaggtgaaaaaata
ggtatagtgggacctaccggtgctggtaaatctacgcttcttgatatacttccaaagctt
gtaagctacaaaggagatgtatatataaaagataaaagtttagaagatataacaaacaaa
tcgataagatctaaaatagcctttgcttctcaacatgttttcatattcaacgatactgtt
agaaacaaccttttaatagcaaatccaaacgcatcagaagagcttttaataaaagctata
aaactagcaaaagcagagtttttgtttacattgaaaaacggtcttgacaccgttttagga
gaatacggatatacagtatcagggggcgaaagacaaagaatagccatagcgaggattttt
ctaacaaatccagatataattttgttagatgaaattacttcagctcttgatgtacataca
gagcaagctgttatatcaaacatttttgaggtttttaaagataaaacaatactaatagtg
gctcataggctctcaaatataataaattgtgacagaattctttacatagaggatggaagg
atattggaagaaggcacttttgaagagctcatgagaaaacaaggcaatttttatactcta
taccaaaaatctagatag
DBGET
integrated database retrieval system
