Hydrogenobaculum sp. Y04AAS1: HY04AAS1_1090
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Entry
HY04AAS1_1090 CDS
T00745
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
hya
Hydrogenobaculum sp. Y04AAS1
Brite
KEGG Orthology (KO) [BR:
hya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hya03400
]
HY04AAS1_1090
DNA repair and recombination proteins [BR:
hya03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HY04AAS1_1090
Archaeal homologous recombinant proteins
HY04AAS1_1090
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
ACG57776
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All DBs
Position
1012323..1013465
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AA seq
380 aa
AA seq
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MIKFLHIGDIHAGKTLHSRSRNDDAEYAISQVIDFVKKEPVDFILMAGDIFDQYTPDAEA
TKIIFDFMVSELNALKIPVVMITGNHDGHSFFEGYKTLAKYANMHLFVKPSTKDYIITIK
DTNIICVPYVFTKILDKTWEDNAASEYAHKVENFINALISKAPRNTFNILLSHMMVKSAK
PTKSEREASIGEYYAINLDNINNLKNLDYVALGHVHKYQKIPTTTDTYYTGSCFQIDFNE
EGQEKYFNFVILEQQSTNKVEKIKLDIKNQLKTLKVNAKSLNIKDIENVKGYVRVIIDDT
IENTRLLESKLTSEHIAGKILEIRRNVFEKPDIEVDLNKIRNNLVDFYEEYYKAKYREDL
PEDLKKAFVELQYKVEHTED
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagtttttacacataggagatatacatgctggcaaaacgcttcacagcagatca
agaaacgatgatgcagaatacgccatatctcaagtgatagattttgtaaaaaaagagcct
gtagatttcatacttatggcaggcgatatctttgatcaatacactccggatgcagaagcc
acaaaaatcatatttgattttatggtaagtgagttaaacgctttaaagattccagtagtc
atgatcaccggaaaccacgatggacatagtttttttgaaggttacaagactcttgccaaa
tacgccaacatgcatttgtttgtaaaaccttctacaaaagattacattattacaataaaa
gataccaacataatatgtgtaccttatgtttttactaagatcttagataaaacctgggaa
gataacgctgcctcagaatatgctcataaagtagaaaattttataaatgcactcatttca
aaagccccaagaaatacctttaatatattgctttcccatatgatggtaaaaagtgcaaaa
ccaacaaaatcagaaagagaagcttccataggggagtattatgcaataaatttagacaac
ataaacaatcttaaaaacttggactacgttgccttagggcatgtgcataaatatcaaaaa
atacccaccactacagatacctattacacaggttcttgttttcaaatagattttaacgaa
gaagggcaagaaaaatacttcaactttgtaattttagaacaacaatccaccaacaaagta
gaaaagataaaattagatataaaaaaccagcttaaaactctaaaagttaatgccaaaagc
ttaaatataaaagatatagaaaacgtaaaaggatacgtaagggtaatcatagacgatacc
atcgaaaatactaggcttttagaatcaaaattaacatcagaacatatagcgggcaaaatc
ttagaaataagaagaaacgtttttgaaaaaccagacatagaagtagatttaaacaaaata
agaaataaccttgtggatttttacgaagaatattacaaggcaaaataccgcgaagatttg
ccagaggatttaaagaaagcattcgtagaacttcaatacaaagtagagcatacagaagac
tag
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