Hydrogenobaculum sp. Y04AAS1: HY04AAS1_1206
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Entry
HY04AAS1_1206 CDS
T00745
Name
(GenBank) sigma-54 DNA-binding domain protein
KO
K03092
RNA polymerase sigma-54 factor
Organism
hya
Hydrogenobaculum sp. Y04AAS1
Pathway
hya02020
Two-component system
hya02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hya00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HY04AAS1_1206
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HY04AAS1_1206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hya03021
]
HY04AAS1_1206
Transcription machinery [BR:
hya03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HY04AAS1_1206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
LacI
Sigma54_AID
HTH_21
Arg_repressor
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
ACG57891
LinkDB
All DBs
Position
complement(1116156..1117343)
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AA seq
395 aa
AA seq
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MCPEGINLDQKLENKIGLNLFLVLSQNVELLQDTATDLEQELKVEEELNPFLKLKVLKPP
KKFFINKEDYTQNIAYSYSYKEHLIKAINEELEGIEKEIAKEIVYSLDSSGFISLETLED
IKNHFGVDWDIVDDARAFVMEIEPIGHGALNPFEYMELQIRTYYKDKKEYIKYLKDLEER
KKIPKEAMEFFSSLKKTPIQIDKTNLLPSKVDIVIEIDQGEILYDIFDNYVEISQENIEE
SLEDKELERYLKQRARRFVEAINLRRKFMKELTKIVVERQQDFFLKDKPLKSLMLKDVAG
EFGISISTVSRLVNSKYVKTPKGVFKLRSFFVRESVSSKSQEEILNMIKKLIQNEETVYT
DKDIEEILRNYGINISRRTVAKYRAKLGIGSSRKR
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtgtccagaaggtataaacctagatcaaaagcttgaaaataagataggtttaaaccta
tttctggtactaagtcaaaatgttgaacttctacaagatactgcaacagatttagagcaa
gagcttaaagtagaagaggagctaaatcctttcttaaaactaaaagtactaaaaccgccg
aaaaagttttttataaacaaagaagactacacccaaaatatagcttactcttactcttat
aaggaacatctcataaaggctataaatgaagagctagagggcatagagaaagagatagcc
aaagaaatagtttattctcttgatagtagcggtttcatatctcttgagacgttagaggat
ataaaaaatcattttggcgtagattgggatatcgtagatgatgccagggcttttgtgatg
gagatagagcccatagggcacggggctttgaatccttttgagtacatggaacttcagata
aggacttattacaaagacaaaaaagagtatataaaatatttaaaagatttagaagaaagg
aaaaaaatacctaaagaggctatggagtttttctcgagtctcaaaaaaacgcccattcag
atagataaaacaaaccttttaccctctaaagtggatattgtaatagaaatagatcaaggg
gagattttatacgatatatttgataactatgtagagatttctcaagaaaatatagaagaa
agcttagaggacaaggagcttgaaagatatttaaaacaaagggctagaaggtttgtagag
gctataaacttaagaaggaagtttatgaaagagctcacaaagattgttgtagaaagacag
caggacttttttttaaaagataaacctcttaaaagcttgatgctaaaagatgtggcaggt
gagtttggtatttctatatccactgtgtcaaggcttgtaaattcaaagtatgtaaaaacg
ccaaaaggagtgtttaagttgaggtctttttttgtaagagagagcgtatcctcaaaaagt
caagaggagatactaaacatgataaaaaaacttattcaaaacgaagaaactgtatacacc
gataaagatatagaagagattttaagaaattacggcataaatatatcaaggcgcacagtg
gcaaagtatagggcaaagcttggtatcgggagttctagaaaaagatga
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