Hydrogenobaculum sp. Y04AAS1: HY04AAS1_1455
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Entry
HY04AAS1_1455 CDS
T00745
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hya
Hydrogenobaculum sp. Y04AAS1
Pathway
hya03420
Nucleotide excision repair
hya03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HY04AAS1_1455
03430 Mismatch repair
HY04AAS1_1455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hya03400
]
HY04AAS1_1455
Enzymes [BR:
hya01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HY04AAS1_1455
DNA repair and recombination proteins [BR:
hya03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HY04AAS1_1455
MMR (mismatch excision repair)
Other MMR factors
HY04AAS1_1455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
AAA_19
UvrD_C_2
Viral_helicase1
DEAD
AAA_11
AAA_30
AAA_12
ResIII
Fuz_longin_1
LRR_RI_capping
Motif
Other DBs
NCBI-ProteinID:
ACG58139
LinkDB
All DBs
Position
1375921..1378068
Genome browser
AA seq
715 aa
AA seq
DB search
MNERLLKDLLEGLNEEQRRVVLSNGKPILVVAGAGSGKTKTIIHKALYLIFNQEYKIRGS
RLLMITFTNKAANEIKERIQKYASVLGKNINIEWIGTFHSVASRIIRKHHAIFGLSNDFR
VLDEEDSVRLFKSILKDQDIKKDEAKKLYIAVNQAIEGIRFLDEDNKFDRKVLELKDIFL
NAMIETSAVTFSYLMGAFKDMLQKDGAFRNYYQNFFDYIIVDEFQDTNTAQYEIIKHISK
KDNICVIGDPNQCIYEWRMAHPDNIISFIEDYNPEIIKLNINYRSSSEILSLANDVLKNS
KAKWKELVPILKSHKKENQTYPKPVITFHPNEEKEAEWIAKKIEELSKSVPLEEIAILVR
VNYITNFLEQALVKAKIPHKIIGALRFFQRKEIKDILAYLHLAINPKDSISFQRAITNPK
RGIGEKTVEKIINLSKQKSIDLIQATKYVLGNKLFEENDFIKAMERLVYNLEKGQAKDRN
ISFYVEKLINDIRYFEYLEQEYKEDYQERIDNVKELLRFFEIEAQKHQENQKERLKELLQ
EISLMEEDEKDNSKAVKIMTVHKAKGLEFEAVFMPRLENGILPHSSAFSDVLDMEEERRL
LYVGITRAKKYLFLSYTAAGKVSDFINIMDKTLLDTSFLPKDTLKDQKVRTLTHYEPISY
KSSKNKVSKVDIKVGDSVFHEVFGEGVVLNISNGVANVRFKDKDRTIVKEFLKPL
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaagattgctaaaagatcttttagaaggactaaatgaagagcagcggagggtg
gttttatcaaacggaaaacccattttggtggtggccggggctggttctggtaagactaaa
acgataatacacaaagccctttatcttatatttaaccaagagtataagataagaggaagt
aggcttttgatgataacctttaccaacaaagccgccaacgagataaaagaaaggatacaa
aaatacgctagtgtattgggtaaaaatataaacatagaatggattggtacgtttcattct
gtggcttcaagaattataagaaaacatcatgcaatatttgggctttcaaacgattttaga
gtgcttgatgaagaagattcagtaaggcttttcaagagcatattaaaagatcaagatata
aaaaaagatgaagctaaaaagctttacatagctgtaaaccaagctatagaaggtataaga
tttttagacgaagacaacaagtttgatagaaaagtgttggaacttaaggatatattttta
aacgctatgatagagacaagcgctgttacattttcatatcttatgggagcttttaaggat
atgctccaaaaagatggggcttttagaaactactatcagaatttttttgattatatcata
gtggacgagttccaagataccaacaccgctcagtacgagataataaaacacatatcaaaa
aaagacaacatatgcgtgataggagacccaaaccaatgcatttacgaatggcgtatggct
cacccagacaacataataagctttatagaagattacaacccagaaataataaaattaaac
ataaactatagatcatcaagcgagatattatctttagccaatgatgttttaaaaaattca
aaagccaaatggaaagagctggtacctattttaaaaagtcataaaaaagaaaatcaaact
tatccaaaacctgttataacgtttcatccaaacgaagaaaaggaagcagagtggatagct
aagaaaatagaggaacttagcaaaagcgtaccattggaagaaatagctatccttgtgaga
gtaaactatataacaaactttttagaacaagctcttgtaaaagcaaagatccctcataag
ataataggtgctttgagattttttcaaagaaaagagataaaagatatactagcatacttg
caccttgctataaatccaaaagatagcatatcttttcaaagagctataacaaatcccaaa
agaggcataggagaaaaaacggtagagaaaattataaacctctctaagcaaaaatctata
gacctaatccaagctacaaagtatgttttaggtaataagctttttgaagaaaacgacttt
ataaaggctatggaaagattggtttataacttggaaaagggacaagctaaagatagaaat
atatctttttatgtggaaaagcttataaacgacataagatattttgagtatttggagcaa
gagtacaaagaagattatcaagagcgcatcgataacgtaaaggagcttttaagatttttt
gaaatagaagcccaaaaacatcaagaaaatcaaaaagaaaggttaaaagagcttttacaa
gagatttctttaatggaagaagatgaaaaagacaactcaaaagccgttaaaattatgacc
gttcacaaggcaaaaggtttggagtttgaagctgtttttatgccaaggcttgaaaatggt
atacttcctcattcttcagcttttagcgatgtgcttgatatggaagaagaaagaagactt
ttatacgttggtattacaagggcaaaaaagtatttgtttttaagttatactgctgctggt
aaagttagcgattttataaacattatggacaaaaccttgctggacacatcgtttttgcct
aaagatacccttaaagatcaaaaagtaagaaccctaacccattacgagcctatatcttat
aaaagctcaaaaaataaagtatcaaaagtagatataaaagttggagatagtgtatttcac
gaggttttcggagagggcgtagttttaaacatatcaaacggcgtagcaaatgtgagattt
aaagataaagatagaaccattgtaaaagaatttctaaaacctctatga
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