Hydrogenophaga sp. PBC: Q5W_00440
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Entry
Q5W_00440 CDS
T04491
Name
(GenBank) Holliday junction DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
hyb
Hydrogenophaga sp. PBC
Pathway
hyb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Q5W_00440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyb03400
]
Q5W_00440
DNA repair and recombination proteins [BR:
hyb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Q5W_00440
RecFOR pathway proteins
Q5W_00440
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
IMS_HHH
5_3_exonuc
Acb2_Tad1_hairpin
Crb2_Tudor
Motif
Other DBs
NCBI-ProteinID:
AOS77550
LinkDB
All DBs
Position
87258..87833
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AA seq
191 aa
AA seq
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MIGKLTGTLLEKNPPQILLDCHGVGYEVDVPMSTFYLLPASGDKVSLLTHFVVREDAQIL
YGFATTAERDAFRQLIKISGVGPRTALSVLSGLSVTDLAQAVSTQETGRIVKVPGIGKKT
AERLLLELKGKLGVDLGLPAGATRSDAQTDIQQALMALGYNEKDASAALKALPADVGVTD
GIKLALKALAK
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgataggcaagttgaccggcaccctgctggagaagaacccgccccagatcctgctggac
tgccacggcgtgggctacgaggtggacgtgcccatgagcaccttctacctcctgcccgcc
agcggcgataaggtgtcgctgctcacccacttcgtcgtgcgcgaggacgcgcagatcctc
tacggcttcgccaccacggccgagcgcgacgccttccggcaactcatcaagatcagcggc
gtgggtccgcgcaccgcgctgtcggtgctgtcgggcctgtcggtgaccgacctggcccag
gccgtgagcacgcaggagaccgggcgcatcgtcaaggtgccgggcatcggcaagaaaacg
gccgagcgcctgctgctcgaactcaagggcaagctcggcgtcgacctgggcctgccggcg
ggggccacgcgcagcgacgcgcagaccgacatccagcaggcgctcatggcgctgggctac
aacgaaaaggacgccagcgccgcgctgaaggcgctgccggcggacgtgggcgtcaccgat
ggcatcaagctggcgctgaaggcgctggccaagtaa
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