Hydrogenophaga sp. PBC: Q5W_00580
Help
Entry
Q5W_00580 CDS
T04491
Name
(GenBank) lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
hyb
Hydrogenophaga sp. PBC
Brite
KEGG Orthology (KO) [BR:
hyb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hyb01011
]
Q5W_00580
Enzymes [BR:
hyb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Q5W_00580
Peptidoglycan biosynthesis and degradation proteins [BR:
hyb01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Q5W_00580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Motif
Other DBs
NCBI-ProteinID:
AOS77578
LinkDB
All DBs
Position
complement(114028..115983)
Genome browser
AA seq
651 aa
AA seq
DB search
MAALLLPSLAWAQTAASDQTLLSMSEAARRGQASELSRLLPTARGHVLEPLARYWEMRAR
LDTAPATEIRAALDAMAGTYWEDRLRNDWLLQLGKNRDWARFEVERPLFRMNDDRQVTCY
TVMLDAAGSRLPPEVAAERVRELWLAQRDVDDGCATAAQALLASGHLRPAVAWLRARLMM
EVGRSRAASQAVGLVEPASVPTVDAIAANPAKYLDDKITAIRPRTKELVTLAIIRLASQD
PVLAADELDSLKWRAQLTAEERGWLWGVIGKRSAQRLQAEALSYFTKGELRFMTDDHLAW
MARAGLRLGRWDAVRDAIYAMSPAQRSEIGWTYWRARSIEALQEPDAAVARAQAREIYET
IASPRDFHGMLAMESLGLPIVAPTPPEPLTAEERRAAEQNPGLRRALAAMRLGLRGEGVR
EWNYQVALHTPGGMPDRELLAAADLACREQLWDRCINTSQRTREAIDMQQRFPTPHREQV
VARTRDIGLDPAYVYGLIRQESRFVVEARSQVGASGLMQVMPATARWTARKIGLSDFRPH
HINERDTNIQIGTAYLKFALDDFEGSLPLAAAAYNAGPSRARAWRNGPVLPGEIWAENIP
FEETRDYVQRVLTNTVNYAALMSGAPQSLRQRLGTVGPRSGAAPAENTELP
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgctgctgccttccctggcgtgggcgcagaccgccgcgtccgaccagacc
ctgctgtccatgagcgaggccgcccggcgcggccaggccagcgaactctcccgcctgctg
cccaccgcgcgcggccacgtgctggagccattggcccgctactgggagatgcgcgcgcgc
ctggacacggcgcccgccaccgagatccgcgccgcgctggacgcgatggccggcacctat
tgggaagaccgcctgcgcaacgattggctgctgcaactcggcaagaaccgcgactgggcg
cgcttcgaggttgagcgtccgctgttccgcatgaacgacgaccgccaggtcacctgctac
acggtgatgctggacgccgccggcagccgactgccgcccgaagtggcggccgaacgcgtg
cgcgaactctggctggcgcagcgcgacgtggacgacggctgcgccacggccgcccaagcc
ctgctggccagcggccacctgcggcccgccgtggcctggctgcgcgctcgactcatgatg
gaagtgggccgcagccgcgcggccagccaggccgtggggctggtggagcccgcctcggtg
cccacggtggacgccatcgcggccaaccccgcgaagtacctggacgacaagatcaccgcc
atccgcccccgcaccaaggaactggtcacgctggccatcatccgcctggcctcgcaggac
ccggtgctggcggccgacgagctcgacagcctcaagtggcgcgcccagctcacggccgag
gagcgcggctggctttggggcgtgataggcaagcggtcggcgcagcgcctgcaagccgaa
gcgttgtcgtacttcaccaagggcgaactgcgcttcatgaccgacgaccacctggcctgg
atggcgcgcgccggcctgcgcctgggccgctgggacgcggtgcgcgacgccatctacgcc
atgagccccgcgcagcgcagcgagatcggctggacctactggcgcgcgcgctcgatcgag
gccctgcaggagcccgacgccgccgtggcgcgcgcccaggcgcgcgagatctacgagacc
atcgcctcgccgcgcgacttccacggcatgctggccatggagtcgctgggcctgccgatc
gtggcgcccacgccgcccgagccgctgacggccgaggagcgccgcgccgccgagcagaac
cccggcctgcgccgcgcgctcgcggccatgcgcctgggcctgcgcggcgagggcgtgcgc
gagtggaactaccaggtggccctgcacacgcccggcggcatgcccgaccgcgagctgctc
gccgccgccgacctggcctgccgcgaacagttgtgggaccgctgcatcaacaccagccag
cgcacgcgcgaggccatcgacatgcagcagcgcttccccacgccgcatcgcgagcaggtg
gtggcgcgcacgcgcgacatcggcctcgacccggcttacgtctacggcctcatccgccag
gaaagccgcttcgtggtggaggcgcgctcgcaggtgggcgcctccggcctcatgcaggtg
atgcccgcgaccgcgcgctggacggcgcgcaagatcggactgagcgacttccgcccgcac
cacatcaacgagcgcgacaccaacatccagatcggcaccgcctacctcaagttcgcgctc
gacgacttcgagggctccctgccgctggccgctgcggcgtacaacgccggtccttcgcgc
gctcgagcctggcgcaacgggcccgtacttcccggcgaaatctgggccgagaacatcccc
ttcgaggaaacgcgcgactatgtgcagcgcgtgctgaccaacaccgtgaactacgcggcg
ctcatgagcggcgcgccgcagtcgctgcgccagcggctgggcaccgtgggcccgcgcagc
ggggcagccccggcggagaacaccgaactgccctga
DBGET
integrated database retrieval system
