Hydrogenophaga sp. PBC: Q5W_01760
Help
Entry
Q5W_01760 CDS
T04491
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
hyb
Hydrogenophaga sp. PBC
Pathway
hyb02020
Two-component system
hyb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hyb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Q5W_01760
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Q5W_01760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hyb03021
]
Q5W_01760
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
hyb02035
]
Q5W_01760
Transcription machinery [BR:
hyb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Q5W_01760
Bacterial motility proteins [BR:
hyb02035
]
Flagellar system
Flagellar assembly proteins
Stator
Q5W_01760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_23
UPF0122
GerE
CT_C_D
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
AOS77798
LinkDB
All DBs
Position
355003..355722
Genome browser
AA seq
239 aa
AA seq
DB search
MYTAKGTLNREDQLRKYSPLVRRLAHHMIAKLPPSVELDDLIQVGMIGLTEAIARYEPSQ
GVQFETFASQRIRGAMIDELRDGDWMSRGSRKSQKDIEQAVHRLQQKLHRAPRESEIAAE
MGLTLADYQALLAKVRGTQLVYLEDIGGGAGDDEDGFLDRHMGDHEADPSAMLMDHRMRL
ALVEAIKTLPEREQHIMSMYYEHDMNLKEIAAVLGVTESRVCQLHSQSIARLRSKMREH
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgtacaccgccaaaggcacgctcaaccgcgaggaccagctgcgcaagtacagccccctg
gtccgtcgcctggcgcatcacatgatcgccaagctgcccccgagcgtggagctcgacgac
ctgatccaggtcggcatgatcggcctgaccgaggccatcgcgcgttacgagccctcgcag
ggcgtgcagttcgagaccttcgccagccagcgcatccgcggcgcgatgatcgacgaactg
cgcgacggcgactggatgagccgcggctcgcgcaagagccagaaggacatcgaacaggcc
gtgcaccgcctgcagcagaagctgcaccgcgcgccgcgcgagagcgagatcgcggccgag
atgggcctgaccctggccgactaccaggccttgctggccaaggtgcgcggcacccagctc
gtgtacctggaggacatcggcggtggcgcgggcgacgacgaggacggcttcctggaccgc
cacatgggcgaccacgaggccgacccctcagccatgctgatggaccaccgcatgcgcctg
gcgctggtggaggccatcaagaccttgcccgagcgcgagcagcacatcatgagcatgtac
tacgagcacgacatgaacctgaaggaaatcgccgccgtgctcggcgtgaccgaatcgcgc
gtgtgccagttgcacagccagtcgatcgcgcgactgcgctcgaagatgcgcgaacactga
DBGET
integrated database retrieval system
