Hydrogenophaga sp. PBC: Q5W_02185
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Entry
Q5W_02185 CDS
T04491
Name
(GenBank) secretin
KO
K02666
type IV pilus assembly protein PilQ
Organism
hyb
Hydrogenophaga sp. PBC
Brite
KEGG Orthology (KO) [BR:
hyb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hyb02044
]
Q5W_02185
02035 Bacterial motility proteins [BR:
hyb02035
]
Q5W_02185
Secretion system [BR:
hyb02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Q5W_02185
Bacterial motility proteins [BR:
hyb02035
]
Pilus system
Pilus assembly proteins
Q5W_02185
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin
AMIN
Secretin_N
STN
type_II_gspD_N0
VP16-like
Motif
Other DBs
NCBI-ProteinID:
AOS77876
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Position
439678..441807
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AA seq
709 aa
AA seq
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MNKPEQATAGTAWGRRMVKGGLVLGLVLSACWAQAQTAIQSVTGGIQSGAEVIRINLSEP
LKATPSSFSVQSPARIALDFPGVANAMGRSTVDINEGNLRSATVVQAGDRTRVVINLKQP
AQFQTRVEGSSLLVVMERPEAVTAQTNPPTHFAESRNLDVSALRDIDFRRGTGNTGRVVV
ELPNNQVGVDIRQQGTGLVVEFLKSSLPEGLRRRLDVTDFGTPVQSVTTTQTGDRVRMVV
SSVGNWEHSAYQSDNQFVLEVREQRVDPNKLSQGPGYTGEKLSLNFQNIEVRALLQVIAD
FTNFNIVTSDSVSGSVTLRLKDVPWDQALDIIMQAKGLGLRKSGNVLWIAPRDEIAAREK
QELEARATVESLEQVRTQSFQMNYAKAADIATQLTSGTGSASGSSSGSGNARILSPRGSV
IAEPRTNQLFVTDIPSRLEQVQGLITKLDIPIRQVLIEARIVEADDDFSKSIGVRLGGGV
RDFSAGSANGNPVRGNFGSNYSAVTTGPALTSSPFVNLPALPPSGQAASYALSLFSPNAS
RFLALEISALESDGKGRVVSSPRVVTADQVKALIEQGTEFPYQTATSSGATAIAFRKANL
KLEVTPQITPEGNIILDLDVNKDTRGETTAEGIAIDTKHVQTQVLVENGGTVVIGGIFER
TERNEIQKVPLLGDLPGVGNLFKSRNQLDQRSELLIFITPRVLGRTAIN
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagccagaacaggcgaccgctggaacagcgtgggggcggaggatggtcaagggg
gggctggttctcggtctcgtcttgtcggcgtgctgggctcaggcgcaaaccgccatccag
tccgtgaccggtggcatccagagtggtgccgaggtgatccggatcaatctgtcggaacca
ctgaaggcgacgccgtcgagtttttcggtgcaatcaccagcccgcattgcgcttgatttc
ccgggcgtcgccaatgccatggggcgcagcacggtggacatcaacgagggcaatctccgc
tctgccacggtggtccaggccggtgaccgcacgcgcgtggtgatcaacctcaagcaaccc
gcgcagttccagacgcgcgtggaaggcagcagtctgctcgtggtgatggagcgtccggag
gcggttacggcgcaaaccaatccgccgacccattttgcggagagccgcaatctggacgtt
agcgccttgcgcgacatcgacttccgtcgcggtaccggcaacaccggccgcgtggtggtc
gagttgccgaacaaccaggtgggcgttgacattcggcaacaaggtactggattggtcgtg
gagttcctgaagagctccctgcctgagggtttgcgtcgtcggctggacgtgaccgacttc
ggtacgccggtgcaatcggtgacgaccacgcagaccggtgatcgtgtgcgcatggtggtg
tcgtcggtgggtaattgggagcactcagcgtaccaaagcgacaaccagttcgtgctcgag
gtgcgcgagcagcgggtcgatccgaacaagctcagccagggtcccggttacacaggcgag
aagctgtcgctgaatttccagaacatcgaggttcgcgccttgttgcaggtcatcgccgat
ttcacgaacttcaatatcgtgacgtccgactccgtctctggttcggtgaccttgcgcctg
aaggacgtgccctgggatcaggcgcttgacatcatcatgcaggccaaaggtctgggtctt
cgcaagtcgggcaacgtgctatggattgcaccgcgcgacgagatcgcggcgagagagaag
caagaacttgaggcgcgcgccacggtggagagcctggagcaagtccgtacgcagtcgttc
cagatgaactacgccaaggcggctgatatcgccacgcaactgacctcagggacggggtcc
gccagtggttcatcgagcggctctggcaatgcgcgcattctgtctcctcggggcagtgtg
atcgccgaaccgcgcaccaatcagttgtttgtgacggacatcccttcgcgcttggagcag
gtacaggggctgattaccaaacttgacatcccgattcgccaggtgctgatcgaggcgcgc
atcgtggaggccgacgacgacttcagcaagtccatcggtgtgcgcctgggcggcggcgtc
cgagatttcagcgccggctccgccaatggcaatcccgtgcggggcaacttcggcagcaac
tactcggccgtgacaaccggcccagcgctgacgtcctcgccctttgtgaatctgcctgct
ctgccgccgtccggccaagccgcgtcctatgccctgtcgctgttcagcccgaacgcgtcg
cgcttcctggccctggagatctcggccctcgaatccgacggcaaggggcgagtggtgtcc
agcccccgcgtagtcacggccgatcaggtcaaggcgctcatcgagcagggcacggaattc
ccgtaccagacggccacctccagtggcgcgacggccatcgcgttccgcaaggccaacctc
aagctcgaagtgacgccgcagatcacccctgaaggcaacatcattctcgacctcgacgtg
aacaaggacacccgaggcgagaccacggcggaaggtattgcgatcgataccaaacatgtg
caaacgcaagtgctggtcgagaatggcggtacggtagtgatcggcggcatcttcgagcgt
accgagcgcaacgagatccagaaggtgccgctgctgggcgacctccctggcgtgggcaac
ctgttcaagtcgcgcaaccagctggatcagcgctccgagttgctgatcttcatcaccccg
cgcgttctggggcgcaccgccatcaactaa
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