Hydrogenophaga sp. PBC: Q5W_03200
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Entry
Q5W_03200 CDS
T04491
Name
(GenBank) ribosomal large subunit pseudouridine synthase C
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
hyb
Hydrogenophaga sp. PBC
Brite
KEGG Orthology (KO) [BR:
hyb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hyb03009
]
Q5W_03200
Enzymes [BR:
hyb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
Q5W_03200
Ribosome biogenesis [BR:
hyb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Q5W_03200
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Orexin
Motif
Other DBs
NCBI-ProteinID:
AOS78055
LinkDB
All DBs
Position
651646..652620
Genome browser
AA seq
324 aa
AA seq
DB search
MKAPIDTPPAVRLITVDEESDGQRLDNFLMRQLKGVPKTHIYRVIRSGEVRRNKARASAD
ERVATGDVLRIPPVRVSHRAEEKAERPAPAREFPVVHEDEGLLAIDKPAGVAVHGGSGVS
FGVIEQLRQSRPSARLLELVHRLDRETSGLLLIAKKKSVLKAVQDQFRERETGKTYLALV
LGDWPESSKVIDVPLHKYLLADGERRVRTTSADDPDGMRAITLVRVARRWPNSPDGRGPL
SLLEVTIKTGRTHQIRVHLASAGHPIAGDDKYGDFERNRELARAGLKRMFLHAWRLRLTH
PQTQSPLQLQTELPSELQRFVDSL
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccccaatcgacaccccgcccgccgtccgcctcatcactgtggacgaggaatcc
gacggccagcggctggacaacttcctgatgcgccagctcaagggtgtgcccaagacgcac
atctaccgcgtgatccgctcgggcgaggtgcggcgcaacaaggcccgcgccagcgccgat
gagcgcgtggccaccggcgacgtgctgcgcatcccgccggtccgcgtctcccatcgggcc
gaggaaaaggccgaacgacccgcgcccgcgcgcgaattccctgtggtgcacgaagacgaa
ggattgctcgccatcgacaagcccgccggcgtggccgtgcacggcggcagcggcgtgagt
ttcggtgtcatcgagcaattgcgccaatcgcgaccgagcgcgcgcctgctcgaattggtg
caccggctggaccgcgaaaccagcggcctgttgctcattgcgaaaaagaagagcgtgctc
aaggcggtgcaggaccagttccgcgaacgcgaaaccggcaagacttatctggcgctggtg
ctgggcgattggcccgaatcgagcaaagtgatcgatgtgccgctgcacaagtacctgctg
gccgacggcgagcggcgcgtgcgcaccacctcggccgacgaccccgatggcatgcgggcg
atcactctcgtcagagtggcccgccgatggccgaactcgccggacgggcgggggccgctg
agcctgttggaggtaacgatcaagaccgggcgcacgcaccagatccgcgttcatttggcc
agtgccggccaccccatcgccggcgacgacaaatacggtgatttcgagcgcaaccgcgaa
ttggcgcgggccggcctcaaacgcatgttcctgcacgcttggcgtctgcggttgacgcat
ccgcaaacccaatcgccgctgcaattgcaaaccgaattgccctccgaactgcaacgtttc
gtcgattcgctttga
DBGET
integrated database retrieval system
