Hydrogenophaga sp. PBC: Q5W_03220
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Entry
Q5W_03220 CDS
T04491
Name
(GenBank) AMP-binding acetyl-CoA synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
hyb
Hydrogenophaga sp. PBC
Pathway
hyb00061
Fatty acid biosynthesis
hyb00071
Fatty acid degradation
hyb01100
Metabolic pathways
hyb01212
Fatty acid metabolism
hyb02024
Quorum sensing
hyb04146
Peroxisome
Module
hyb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hyb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Q5W_03220
00071 Fatty acid degradation
Q5W_03220
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Q5W_03220
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q5W_03220
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hyb01004
]
Q5W_03220
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hyb04147
]
Q5W_03220
Enzymes [BR:
hyb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Q5W_03220
Lipid biosynthesis proteins [BR:
hyb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Q5W_03220
Exosome [BR:
hyb04147
]
Exosomal proteins
Exosomal proteins of breast milk
Q5W_03220
Exosomal proteins of breast cancer cells
Q5W_03220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Motif
Other DBs
NCBI-ProteinID:
AOS78059
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All DBs
Position
complement(654565..656256)
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AA seq
563 aa
AA seq
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MSAKIADDLLALQRLYDWEKKAPTRVALTQPMGGGVVHDFTWAQVADQTRRMAAHLQSQG
WAPGSKVAILSKNCAWWMMSDLAIWMADYVSVPLYPTLAPETIRQILTHSESKALFVGKL
DGWEGMKPGVPADLPCISYPLSPVDAIQAYDGWDAICARTEPLKGQPVRAENDLATLIYT
SGTTGLPKGVMHSFGNFAWALDKGLARIPLTQNDRMLSYLPLAHVVERMLVEHGWLRTGM
HVFFAESLDTFAADLQRARPTVFFSVPRLWVKFQQGIHAKMPPAKLQRLLGIPILGGIVR
RKIQKALGLDQCKFAAGGAAPMPPALLQWYAKLGIPVNEGYGMTENLALSHITEAGKNQQ
GTVGPTYPGVEQRIDPQTGEIQMRSQALMQGYYKEPEKSREAFTEDGWLKTGDKGSIDAG
GLLRITGRVKDLFKTGKGKYVAPAPIEDKLVMHEAVEACVVTGANLGQPLGICMLSPDAA
EKAKHPDERAALERSLAEHRATINATLDPHEQLQCLVVVSTPWTVDNDMITPTFKVKRNR
IEDVYARNYENWETTGRPVLWAD
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgaagatcgccgacgacctgctggccctgcaacgcctgtacgactgggagaag
aaggcgcccacgcgcgtggcgctgacgcagcccatgggcggcggcgtggtgcacgacttc
acctgggcccaggtggccgaccagacgcgccgcatggccgcgcacctgcagtcccagggc
tgggcaccgggcagcaaggtggccatcctctccaagaactgcgcctggtggatgatgagc
gacctggcgatctggatggcggattacgtgtcggtgccgctgtaccccacgcttgcgccc
gagaccatccgccagatcctcacgcacagcgaatcgaaggccctgttcgtgggcaagctc
gacggctgggagggcatgaagcccggcgtgcccgccgacctgccctgcatcagctacccg
ctgtcacccgtggacgcgatccaggcctacgacggttgggacgccatctgcgcgcgcacc
gaacccttgaagggccaaccggttcgggcggagaacgacctggccacgctgatctacacc
tcgggcaccaccggcctgcccaagggcgtgatgcacagcttcggcaacttcgcctgggcg
ctcgacaagggcctggcgcgcatccctctcacgcaaaacgaccgcatgctgagctacctg
ccgctggcccacgtcgtggagcgcatgctggtggagcacggctggctgcgcacgggcatg
cacgtgttcttcgccgaatcgctggacaccttcgcggccgacctgcagcgcgcgcggccc
acggtgttcttctcggtcccgcgcctgtgggtcaagttccagcagggcattcacgccaag
atgccgccggccaaactccagcgcctgctgggcattcccatcctgggcggcatcgtgcgc
cgcaagatccagaaggccctgggcctggaccagtgcaaattcgccgctggcggtgccgcg
cccatgccgcccgcgttgctgcagtggtacgcgaagctgggcattcccgtcaatgagggc
tacggcatgaccgaaaacctcgcgctgtcgcacatcaccgaggcggggaagaaccagcag
ggcaccgtggggcccacctacccgggcgtggaacagcgcatcgacccgcagaccggcgaa
atccagatgcgcagccaggcgctgatgcagggctactacaaggagcccgagaaaagccgg
gaggccttcaccgaggacggctggctcaagaccggcgacaagggcagcatcgatgcgggt
ggcctgctgcgcatcaccggccgcgtgaaggatctgttcaagaccggcaagggcaaatac
gtggcgcccgcacccatcgaggacaagctggtgatgcacgaggccgtggaggcctgcgtg
gtgaccggtgccaacctgggccagccgctgggcatctgcatgttgagccccgacgcggcc
gagaaggcgaagcaccccgacgagcgcgccgcgctggagcgctcgctcgccgagcaccgc
gcgacgatcaacgccacgctggatccgcacgagcagttgcagtgcctggtggtggtgtcc
acgccctggacggtggacaacgacatgatcacgcccaccttcaaggtcaagcgcaaccgc
atcgaggacgtgtacgcgcgcaactacgagaactgggagaccactggcaggccggttctc
tgggcggattga
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