KEGG   Hydrogenophaga sp. PBC: Q5W_04230
Entry
Q5W_04230         CDS       T04491                                 
Name
(GenBank) ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
hyb  Hydrogenophaga sp. PBC
Pathway
hyb00230  Purine metabolism
hyb00240  Pyrimidine metabolism
hyb01100  Metabolic pathways
hyb01232  Nucleotide metabolism
Module
hyb_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
hyb_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:hyb00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    Q5W_04230
   00240 Pyrimidine metabolism
    Q5W_04230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hyb03400]
    Q5W_04230
Enzymes [BR:hyb01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     Q5W_04230
DNA repair and recombination proteins [BR:hyb03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    Q5W_04230
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_lgN RNR-II_ins_dom Fox-1_C Zn_ribbon_FGT1_2
Other DBs
NCBI-ProteinID: AOS78239
LinkDB
Position
863345..865786
AA seq 813 aa
MNREPTARDLLPELDPQPISEEVLREKYLKDGETTREQLFARVARALASVEAPERRAEFE
PRFLDLLCQGGIGAGRIMSAAGTELQATLINCFVQPVGDAIQGRDEAGYPGIYEALREAA
ETMRRGGGVGYDFSRIRPRGARVKVTASIASGPCSYINVFDQSCATVESAGARRGAQMGV
LRIDHPDVREFITAKRTPGRWNNFNVSVAVPDTFMDAVLADGPWELVHTAQPGPEQMARG
AHQRDDGRWVYETVRARELWDVIMQSAYDFAEPGILFIDAIGRDNNLRAIENIEATNPCG
EQPLPPYGCCDLGPVILTRFVRHPFGVGGDAAFDFEAFERTVALQVRALDNVLDLTYWPL
PEQRAEAQAKRRIGVGFTGLGDALILLKLRYDSEAGVAMAARIAERLRDAAYRASVELAK
EKGVFPKLDVESYLASGTFASRLPDDIQQAIRTHGIRNSHLLSIAPTGTVSLAFADNASN
GIEPAFSWTYTRKKREADGSTREHEVSDHAWRLWRALGGDVQQLPPYFVSALEMGVDGHL
GMMAAVQPFIDTSISKTVNVPADYPFEEFKDLYLKAWRGGLKGLATYRPNDILGAVLSVP
GASSAEEPTAPAPGDPMRSVIEQRPLGALDAVAEKIEYWTQEGHHTTYIVVSFLPVPAAD
GQSGTQSRAIEFFMPVGQRAESQQWITASMRLLSLAARGGFLDRALRDMRKVAWDRGPVR
LGTRTREDGAVIPMWHDSEVAALAFAVQNILERRRGVAGAVSVATPVAPPSTVALSVPGQ
MAGRKCPECGAHAMIRKDGCDHCTACGYVGSCG
NT seq 2442 nt   +upstreamnt  +downstreamnt
atgaaccgagaacccacagcgcgcgatctgctgcccgaactggacccccagcccatcagc
gaagaggtgctgcgcgagaagtacctcaaggacggcgagaccacgcgcgagcagctcttc
gcccgcgtggcgcgcgccctggccagcgtcgaggcgccggagcgccgcgccgaattcgaa
ccgcgcttcctggacctgttgtgccagggcggcatcggcgccgggcgcatcatgagcgcg
gccggtaccgagctgcaggccacgctcatcaattgcttcgtgcaaccggtgggcgacgcc
atccagggccgtgacgaggccggctaccccggcatctacgaagcccttcgcgaagccgcc
gaaaccatgcgacgcggtggcggcgtgggctacgacttctcgcgcatccgcccgcgcggc
gcgcgcgtgaaggtcaccgcctccattgcctccgggccctgcagctacatcaacgtgttc
gaccagtcctgcgccacggtggagagcgcgggcgcgcggcgcggcgcgcagatgggcgtg
ctgcgcatcgaccaccccgacgtgcgcgagttcatcaccgccaaacgcacgcccgggcgc
tggaacaacttcaacgtctcggtggccgtgcccgatacattcatggacgcggtgctggcc
gacggcccctgggaactggtgcacacggcgcagccggggccggagcagatggcccgcggc
gcgcaccagcgcgacgacggccgctgggtgtacgagaccgttcgcgcgcgcgagctgtgg
gacgtgatcatgcaatccgcctacgacttcgccgagccggggatcctgttcatcgacgcg
atcgggcgcgacaacaatctgcgcgccattgaaaacatcgaggccacgaatccttgcggc
gagcaacccctccctccctacggctgctgcgacctcggccccgtcatcctcacgcgcttc
gtgcgccaccccttcggcgtgggcggcgacgccgccttcgacttcgaggccttcgagcgc
accgtggccctgcaagtgcgcgcgctcgacaacgtgctcgacctcacgtactggcccttg
cccgagcaacgcgccgaggcgcaggcgaagcggcgcatcggcgtgggcttcacgggcctg
ggcgacgcgctcatcctgctcaagctgcgatacgacagtgaggccggcgtggccatggcc
gcgcgcatcgccgagcgcctgcgcgacgcggcctaccgcgcctcggtggaattggcgaaa
gagaagggcgtcttcccgaagctggatgtcgagagctacctggccagcggcaccttcgcc
agccgcctgccggacgacatccagcaggccatccgcacacacggcatccgcaacagccac
ctgctgtcgatcgcgcccacgggcaccgtgagcctggccttcgccgacaacgcctccaac
ggcatcgagcctgccttctcctggacctacacacgaaagaagcgcgaggccgacggcagc
acgcgcgagcacgaggtgagcgaccacgcctggcgcctgtggcgcgcgctcggcggtgac
gtgcagcagttgccgccgtacttcgtctccgctctggagatgggcgtggacggccacctg
ggcatgatggccgcggtgcagcccttcatcgacacctccatatcgaagacggtgaacgtg
cccgccgactacccgttcgaggaattcaaggacctgtacctgaaggcctggcgcggtggc
ctgaagggcctggccacttaccggcccaatgacatcctcggcgccgtgctgtcggtgcca
ggggccagcagcgccgaggaacccacggcgcccgcgcccggcgaccccatgcgcagcgtg
atcgagcagcgcccgctgggtgcgctggacgccgtggccgagaagatcgagtactggacg
caggaaggccaccacaccacctacatcgtggtgtccttcctgcctgtgccggcggccgac
ggccagagtggcacgcagtcgcgcgccatcgagttcttcatgcccgtgggccagcgcgcc
gagtcgcagcagtggatcaccgccagcatgcgcctgctctcgctggccgcacggggtggc
ttcctggaccgcgcgctgcgcgacatgcgcaaggtggcctgggaccgcggccccgtgcgc
ctgggcacgcgcacccgcgaggacggtgctgtcatccccatgtggcacgactccgaagtc
gcggccctggccttcgcggtgcagaacatcctggagcgccgccgtggcgtggcgggcgcg
gtgtccgtcgccacgcccgtcgcgccaccgtcgacggtggccttgtcggtgccgggccag
atggccgggcgcaagtgccccgagtgcggcgcgcacgccatgatccgcaaggacggctgc
gaccactgcacggcctgcggctacgtaggctcctgtggctga

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