Hydrogenophaga sp. PBC: Q5W_04310
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Entry
Q5W_04310 CDS
T04491
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
hyb
Hydrogenophaga sp. PBC
Pathway
hyb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hyb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q5W_04310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hyb02000
]
Q5W_04310
Transporters [BR:
hyb02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Q5W_04310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Methyltransf_17
Motif
Other DBs
NCBI-ProteinID:
AOS78251
LinkDB
All DBs
Position
complement(883379..884962)
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AA seq
527 aa
AA seq
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MPTTRRFTLACALGAALVLATAPAAAQSASSTLRLVPSSDLKVLDPTWTTAVVTRNHGYM
IYDTLFGTDAQGRIQPQMVESHTVSADGKTWTFKLRPGLAFHDGQAVTAEDVLASLARWA
KRDPMGQRMYGALAKAEAVSANSFRLNFNEPYGAVLESLGKPSSLVPFILPRRLAETPAD
QQIAEHIGSGPYVFKADEFRPGERAVYLKNEKYVPRKEAPSGTTGAKLVKVDRVEWVVLK
DAQTQVNALVNGEVDMLESVPFEHYKALKANPKITVTAAAGGQYLLRFNHLVPPFNDARV
RQAAMLSMNQDALLRTQVGIPELYKTCMSVYPCGSPLASNKSLGMTAKPDFAKARELLKQ
AGYKGQPVVLLHATDNSSLAKLPPVVAQLLRQGGFTVDMKSMDWGSVVARRAKKEPADQG
GWNAFVTYWGSEDALNPINYAPLSANGESGWFGWASDQRLEDLRAAFARAGDEAHRKQLA
EDIQVRAYEIGAFAPMGELLRPVAFRQGAVQGVLVGSTNVYWNISKP
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccacgcgtcgtttcacgctcgcctgcgcccttggcgccgccctcgtcctggcc
accgcgcccgccgcggcgcagtccgccagcagcaccttgcggctcgtgccctcgtccgac
ctgaaggtgctggaccccacctggaccaccgccgtggtcacgcgcaaccacggctacatg
atttacgacacgctcttcggcaccgacgcgcagggccgcatccagccgcagatggtcgag
tcgcacaccgtcagcgccgacggcaagacctggacgttcaagctgcgccctggcctggcc
ttccacgacggccaggccgtgacggccgaggacgtgctggcctcgctcgcgcgctgggcc
aagcgcgaccccatgggtcagcgcatgtatggcgccctcgcgaaggccgaggccgtgtcg
gccaacagcttccgcctgaacttcaatgagccctacggcgcggtgctcgaatcgctgggc
aagccctcgtcgctggtgcccttcatcctgcccaggcgcttggccgagacgccggccgac
cagcagattgccgagcacatcggctccggcccctacgtcttcaaggccgacgaattccgc
cccggcgagcgcgcggtctatctgaagaacgagaagtacgtcccgcgcaaggaggcgccg
tccggcaccacgggcgccaagctggtgaaggtggaccgcgtggaatgggtcgtgctcaag
gacgcgcagacccaggtcaacgccctcgtcaacggcgaggtggacatgctcgagtcggtg
cccttcgagcactacaaggcgctcaaggcgaacccgaagatcactgtcaccgcggccgcg
ggcggccagtacctgctgcgcttcaaccacctggtgccacccttcaacgacgcgcgcgtg
cgccaggccgcgatgctgtccatgaaccaggacgcgctgctgcgcacccaggtcggcatc
cccgagctctacaagacctgcatgtcggtctacccctgcggttcgcccctggcgtccaac
aagagcctgggcatgaccgccaagccggacttcgccaaggcgcgcgagctgctcaagcag
gccggctacaagggccagcccgtggtactgctgcacgccaccgacaacagctccctggcc
aagctgccgccggtggtggcgcaactgctgcgccagggcggcttcaccgtggacatgaag
tccatggactggggctcggtcgtggcgcgccgcgccaagaaggagccggccgatcaaggc
ggctggaacgcgttcgtcacctactggggctcggaggacgcgctcaaccccatcaactac
gcgccgctgtcggccaatggcgaatccggctggttcggctgggccagcgaccagcgcctg
gaagacctgcgcgccgctttcgcgcgcgccggcgacgaggcccatcgcaagcaactggcc
gaggacatccaggtccgtgcctacgagatcggcgccttcgcgcccatgggtgagctgctg
cgccccgtggccttccgccaaggcgcggtgcagggcgtgctcgtgggctcgaccaacgtg
tactggaacatcagcaagccctga
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