Hydrogenophaga sp. PBC: Q5W_05040
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Entry
Q5W_05040 CDS
T04491
Name
(GenBank) recombinase
KO
K06400
site-specific DNA recombinase
Organism
hyb
Hydrogenophaga sp. PBC
Brite
KEGG Orthology (KO) [BR:
hyb00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99978 Cell growth
Q5W_05040
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GFIT
Motif
Pfam:
Resolvase
Recombinase
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
AOS78377
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Position
complement(1015759..1017126)
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AA seq
455 aa
AA seq
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MSTVVTKKRCAVYTRVSTDERLDQSFNSLDAQREAGQAYIVSQRAEGWLPVADDYDDGGY
SGGNMERPALKRLMADIIADQIDIVIVYKIDRLTRSLTDFAKLVEVFERHKVSFVSVTQQ
FNTTTSMGRLMLNILLSFAQFEREVTGERIRDKIAASKRKGLWMGGYTPLGYEVKDRKLV
IEERDAETIRRIFTRFTETRSITDIVREMALEGITTKPNRLKDGRVRNGTPMDKKYISKV
LRNPIYVGEIRHKGEVFAGQHEPIITRQLWDRVQAILAEDAHQRMGKTQTRHKTDALLRG
LMYGPDGGKYHITYSKKPSGKKYRYYIPKADSRYGYRSSATGMIPADQIEEVVVNLLVGA
LQSPESIQGVWNTVRINYPEIDEPTTVLAMRRLGEVWKQLFPAEQVRLVNLLIERVQLLS
DGIDIVWRESGWRDLAGELQANSIGGEMLEMELVP
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
gtgagcactgtcgtgaccaagaaacgctgcgccgtctacacccgcgtgtccacggacgag
cgcctcgaccaatccttcaattccctcgacgcccagcgcgaagcgggccaagcctacatc
gtgagccagcgtgccgagggctggttgccggtggccgacgactacgacgacggcggctac
tcgggaggcaacatggagcgcccggccttgaagcgactgatggccgacatcattgccgac
caaattgacatcgtgatcgtctacaagatcgaccgcctgacacgcagcctcaccgacttc
gccaagctggtggaggtgttcgagcgccacaaggtgtcgttcgtttcggttacccagcaa
ttcaacaccaccacgtcgatgggacggctgatgttgaacatcctgctgtccttcgcgcag
tttgagcgtgaagtcaccggcgagcgcatccgcgacaaaatcgccgccagcaagcgcaag
ggcctgtggatgggcggttacaccccgctgggctacgaggtcaaagaccgcaagctggtc
atcgaggagagggatgccgaaaccatccgacgcattttcacgcgcttcactgagacacgc
tccatcacggatatcgtccgcgagatggccctggagggaatcactaccaagcccaaccgc
ctgaaggatggccgcgtgcgcaacggcacgccaatggacaagaagtacatctctaaggta
ctgcgcaatccaatctacgttggcgagatccgccataaaggggaggtgtttgctggacag
cacgagccgatcatcacccgccagctttgggatcgcgtgcaagccatcctcgccgaggat
gctcaccagcgcatgggcaagacccaaacccggcacaagaccgatgcgttgttgcgcgga
ctgatgtacggccctgatggtggcaagtaccacatcacctacagcaagaagccctcgggc
aagaagtaccgctactacatccctaaggcggacagccgctacggctaccgcagcagcgcc
accgggatgatcccggccgaccagatcgaggaagtggtggtgaacctgctggtgggcgcg
ctccagtcgcccgaaagcatccaaggggtctggaacacggtgcgcatcaactacccggag
atcgacgagccaaccaccgtgctggccatgcgccgcctcggcgaggtctggaagcagttg
ttccccgctgaacaggtgcggctggtcaacctgctgattgagcgtgtccagctcctctcc
gatggcatcgacatcgtctggcgtgagtcgggatggcgggatctggccggtgagttgcag
gcgaacagcattgggggcgaaatgctggaaatggagcttgtcccatga
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