Hydrogenophaga sp. PBC: Q5W_05785
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Entry
Q5W_05785 CDS
T04491
Name
(GenBank) hypothetical protein
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
hyb
Hydrogenophaga sp. PBC
Pathway
hyb02020
Two-component system
hyb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hyb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Q5W_05785
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q5W_05785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hyb03000
]
Q5W_05785
Transcription factors [BR:
hyb03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
Q5W_05785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
TrmB
HVO_A0261_N
HTH_24
MarR
MarR_2
DUF7343
HTH_Cmi2_C
GntR
Rrf2
WHD_DUF6293
RepL
HTH_11
DUF7481
HTH_6
7TMR-HDED
Motif
Other DBs
NCBI-ProteinID:
AOS78513
LinkDB
All DBs
Position
1184616..1185290
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AA seq
224 aa
AA seq
DB search
MSILSNLDLIRRVPLFSTLTQAQAESVADAVVKRRYKRGEMIVEQGKKSNCLAIVLTGRA
RVVTTDSRGREVILATMNPGDYVGEMSLIDNQPHSATVRAEVQTDVLILGRNEFARCLPE
NSSMAYAVMRGLVQRLRQADRKIESLALLDVYGRVARALLEQAQPGRDGQLMIRERVSRQ
DVAKMIGASREMVSRVMKDLEDRGFIEVAEDGSTIIKERLNTLG
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtccattctgtccaatctcgacctgatccgccgtgtgccgctgttttcaaccctcaca
caggcccaggccgagtcggtggccgatgcggtggtcaagcgccgctacaagcgcggcgaa
atgatcgtggaacagggcaagaagtcgaactgcctggccatcgtgctcaccggccgggcc
cgggtcgtcaccaccgacagccgaggccgcgaggtcatcctggcgaccatgaaccccggc
gactacgtgggcgagatgagcctgatcgacaaccagccgcactcggccaccgtgcgcgcc
gaggtgcagaccgacgtgctgatcctgggccgcaacgagttcgcgcgctgcctgcccgag
aactcgtccatggcctatgccgtcatgcgcggcctggtccagcgcctgcgccaggccgac
cgcaagatcgaatccctggccctgctcgacgtgtacggccgcgtggcccgtgccctgctg
gagcaggcccagccgggccgcgacggccagttgatgatccgcgagcgcgtctcgcgccag
gacgtggccaagatgatcggcgcctcgcgcgaaatggtcagccgcgtcatgaaggacctg
gaagaccggggcttcatcgaggtcgccgaggacggcagcaccatcatcaaggaacggctc
aacaccctcggttga
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