Hydrogenophaga sp. PBC: Q5W_05835
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Entry
Q5W_05835 CDS
T04491
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
hyb
Hydrogenophaga sp. PBC
Brite
KEGG Orthology (KO) [BR:
hyb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hyb03021
]
Q5W_05835
Transcription machinery [BR:
hyb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Q5W_05835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_3
IF2_N
Motif
Other DBs
NCBI-ProteinID:
AOS78522
LinkDB
All DBs
Position
complement(1196862..1197818)
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AA seq
318 aa
AA seq
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MTHSLVPVAAAPSSDLAVAGSWSRALTLPPLGHLDAYISAVNRLPMLSLEEEQDAARRLR
DHNDLEAAGRLVMSHLRLVVSISRQYLGYGLPHGDLIQEGSVGLMKAVKRFDPDQGVRLV
SYAIHWIKAEIHEYILKNWRMVKLATTKAQRKLFFNLRSRKQGLRAEAADGDTHREVLSD
AEIGLMARELNVKPEEVREMETRLSGGDVVLDPAPSDDGDDAFGPIAYLADGSHEPTAMI
ESAQRDQLATEGVARALSELDERSRRIVSERWLQVNDDGSGGMTLHELAAEYGVSAERIR
QIEVAAMKKMRKALAAYA
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgacccattcgcttgtacccgtggccgctgcgccgagcagcgatctggccgtggccggt
tcctggagccgcgcgctcacgctgccgccgctgggccatctggatgcgtacatctccgcc
gtaaaccgcctgccgatgctcagcctggaagaggagcaggacgcggcgcgccgcctgcgc
gatcacaacgacctggaggccgccggccgcctggtcatgtcgcacctgcgtctggtggtc
tccatctctcgacagtacctgggctacggcctgccccacggcgacctgatccaggagggc
agcgtgggcctgatgaaggccgtcaagcgcttcgaccccgaccagggtgtgcgcctggtg
agctacgccatccactggatcaaggcagagatccacgagtacatcctgaagaactggcgc
atggtgaagctggccaccaccaaggcccagcgcaagctgttcttcaatctgcgctcacgc
aagcaaggcctgcgcgccgaggccgccgacggcgacacacaccgcgaggtgctgagcgac
gccgagatcggtctgatggcgcgcgaactgaacgtcaagcccgaagaggtgcgcgagatg
gaaacgcgcctgtcgggcggcgacgtggtgcttgaccccgcgcccagtgacgacggcgac
gacgccttcggtcccattgcctacctggccgacggctcgcacgagcccaccgccatgatc
gagtccgcgcagcgcgaccagctcgccaccgagggcgtggcacgcgccctgagcgagctc
gacgagcgttcgcgccgcatcgtgagcgagcgttggctgcaggtgaacgacgacggttcg
ggcggcatgacgctgcacgaactggccgccgagtacggcgtcagcgccgagcgcattcgc
cagatcgaggtggccgccatgaaaaagatgcgcaaggcgctcgccgcctacgcctga
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