Hydrogenophaga sp. PBC: Q5W_06460
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Entry
Q5W_06460 CDS
T04491
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
hyb
Hydrogenophaga sp. PBC
Brite
KEGG Orthology (KO) [BR:
hyb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyb03032
]
Q5W_06460
03036 Chromosome and associated proteins [BR:
hyb03036
]
Q5W_06460
03400 DNA repair and recombination proteins [BR:
hyb03400
]
Q5W_06460
DNA replication proteins [BR:
hyb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Q5W_06460
Chromosome and associated proteins [BR:
hyb03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Q5W_06460
DNA repair and recombination proteins [BR:
hyb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Q5W_06460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AOS78632
LinkDB
All DBs
Position
complement(1320719..1321042)
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AA seq
107 aa
AA seq
DB search
MTRSDLVEALAARFGQLTHRDAEFAVKAILDAMGDALVKGHRIEIRGFGSFSVNRRSPRI
GRNPRSGESVMIPEKRVPHFKPGKALREQVDERTALMQQHEDKQRTG
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcagcgatcttgtcgaagccctggccgcccggttcggccagctcacccaccga
gatgccgagttcgccgtcaaggcgatcctcgacgccatgggcgacgccctggtgaagggc
caccgcatcgagatccggggcttcggcagtttctcggtcaatcgccgctcgcctcgcatc
ggacgcaacccgcgttcgggcgagagcgtgatgattcccgagaagcgcgtgccccacttc
aagcccggcaaggccctgcgcgagcaggtcgacgagcgcaccgccctcatgcagcagcac
gaggacaagcagcgcacgggctga
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