Hydrogenophaga sp. PBC: Q5W_06530
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Entry
Q5W_06530 CDS
T04491
Name
(GenBank) recombinase
KO
K06400
site-specific DNA recombinase
Organism
hyb
Hydrogenophaga sp. PBC
Brite
KEGG Orthology (KO) [BR:
hyb00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99978 Cell growth
Q5W_06530
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Gene cluster
GFIT
Motif
Pfam:
Resolvase
Recombinase
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
AOS78645
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Position
complement(1334889..1336238)
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AA seq
449 aa
AA seq
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MNAPLLVSPKRCAVYCRVSSDERLDQSFNSIDAQKEAGHAFIKSQSHEGWIAVADDYDDG
GFSGGNMERPALKRLMADIQMGKVDIVVVYKIDRLSRSLADFARMVDVFDRHRVSFSAVT
QQINSATSMGRLMLNVLLSFAQFEREVTGERIRDKIAASKAKGMWMGGPLPLGYDVRDRL
LVINEAEAKLVSRIFDDFVTVRSATLMAKAYGAQGVVTKGGKPFTKQTIYKMLHNRMYLG
EIVHKGQSFPGQHQAIVTQAQWDAVHALIATDGIERRRETNDRQSEPVLLRGLLFTSDGE
RLVPSYTKKKGKTYRYYSPIKHRRFGAWASQHGPLPAVPIEELVTQQIVAALSAPHIVQS
VWDRMRHIRPDLTEPQVVLPMRNLASLWWELFPAEQCRLAQLLIERVVIADGGLEIIWRD
QGWQELAGELMPGTIGAELQEWEQQEVEA
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgcccctgctcgtttcacccaagcgctgcgcggtgtactgccgtgtttccagc
gacgaacggctggatcagtccttcaattccatcgatgcccagaaggaagccggtcacgcc
ttcatcaagagccagagccacgagggttggattgccgtggccgacgactacgacgatggt
ggtttctccggcggcaacatggagcgtcctgccttgaagcgcctgatggcagacattcag
atgggcaaggtcgacatcgtggtggtttacaagatcgaccggctgtcccgctcgctggcg
gatttcgcacggatggtcgatgtgttcgaccgccaccgcgtcagcttcagcgccgtcacg
cagcagatcaactctgcgacctcgatggggaggttgatgctcaacgtgctgctttccttc
gcgcagtttgagcgcgaggtgaccggcgagcgcatccgcgacaagatcgcggccagcaag
gccaaaggcatgtggatgggcgggccgctgccgctggggtatgacgtgcgcgaccgttta
ctggtcatcaatgaggccgaagctaagttggtgagccgcatcttcgatgacttcgtgacc
gtgcgttcggccacgctgatggccaaggcctacggcgcgcaaggtgtggtcaccaagggc
ggcaagcccttcaccaagcagaccatctacaagatgctgcacaaccgcatgtacctgggc
gagatcgtccacaagggtcagagcttccccggccagcaccaggccatcgtgacgcaggcg
cagtgggatgcagtccacgcgttgatcgccaccgatggcatcgagcggcggcgcgaaacc
aacgaccgccagagcgaaccggtgctgctgcgcggcctgctgttcacgtccgatggcgaa
cggctggtacccagctacaccaagaagaaaggcaagacctaccgctactacagcccgatc
aaacaccggcgctttggcgcatgggccagtcaacacggcccgttgccagccgtgccgatt
gaagagttggtcacacagcagatcgtggcagcactgtcggccccgcacatcgtgcagtcg
gtgtgggatcggatgcggcacattcggccagacctcaccgaaccgcaagtcgtgctgccg
atgcgcaaccttgccagcctgtggtgggagttgtttccggcagagcagtgtcgactggcg
cagttgctgatcgagcgcgtggtgattgccgacggcgggctggaaatcatctggcgcgat
cagggctggcaggaactggccggggaactgatgcccggcaccatcggcgcggaattgcag
gaatgggaacagcaggaggtggaggcatga
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