Hydrogenophaga sp. PBC: Q5W_07075
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Entry
Q5W_07075 CDS
T04491
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase (NADP(+))
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
hyb
Hydrogenophaga sp. PBC
Pathway
hyb00250
Alanine, aspartate and glutamate metabolism
hyb00310
Lysine degradation
hyb00350
Tyrosine metabolism
hyb00650
Butanoate metabolism
hyb00760
Nicotinate and nicotinamide metabolism
hyb01100
Metabolic pathways
hyb01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
hyb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Q5W_07075 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Q5W_07075 (gabD)
00310 Lysine degradation
Q5W_07075 (gabD)
00350 Tyrosine metabolism
Q5W_07075 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
Q5W_07075 (gabD)
Enzymes [BR:
hyb01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
Q5W_07075 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
Q5W_07075 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
Q5W_07075 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AOS78745
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Position
complement(1461817..1463295)
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AA seq
492 aa
AA seq
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MDMKTSPLAQLNDPSLLKTDGLINGQWVKGGARFDVNDPATGQKLADVANLGAADAEAAI
AAADKAWPAWRARSAKERANLLRKWYDLLMANQEDLGRILTAEQGKPFAEGKGEIAYGAS
FVEWFAEEAKRVNGETLPTFDPNRRLLVLKQPIGVCAAITPWNFPLAMITRKVAPALAAG
CPVVIKPAELTPLTALAAAELALRAGIPAGVLNVITADSQQSIAVGKALCASDTVRHLSF
TGSTEVGRILMAQCAPTVKKLALELGGNAPFIVFDDADVDSAVEGALASKYRNAGQTCVC
ANRFYVQAGVYDEFVKKFAAKVKAFKVGNGFEDGVVQGPLIEDAAVEKVQRHVDDAVAKG
GTVVAGGKKLQGQFFEPTVVAGATPDMLCAREETFGPFAPVFKFETEQEAIDAANNTEFG
LASYFYSRDVGRIFRVSEALEYGMVGINVGILATEHVPFGGVKQSGLGREGSHHGMDDYV
EIKFLCLGDVLK
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggacatgaaaacctcccccctggcccagctgaacgaccccagcctgctcaagaccgac
ggcctgatcaatggccagtgggtcaagggtggcgcccgcttcgacgtgaacgaccccgcc
accggccagaagctggccgacgtggccaacctgggcgcggccgacgccgaggccgccatc
gccgccgccgacaaggcctggccggcctggcgcgcgcgcagcgccaaggaacgcgccaac
ctgctgcgcaagtggtacgacctgctgatggccaatcaggaagacctgggccgcatcctc
accgccgagcagggcaagcccttcgctgaaggcaagggcgagatcgcctatggcgccagt
ttcgtggagtggttcgccgaggaagccaagcgcgtcaacggcgagaccctgcccaccttc
gaccccaaccgccgcctgttggtgctcaagcagcccatcggcgtgtgcgcggccatcacg
ccctggaacttcccgctggccatgatcacgcgcaaggtggcaccggccctggccgccggc
tgccccgtcgtcatcaagccggccgagctcacgcccctcacggcgctggcagcggccgag
ctggcgctgcgcgcgggcatcccggccggcgtgctcaacgtcatcaccgccgattcgcaa
cagagcatcgccgtgggcaaggccctgtgcgccagcgacacggtgcgccacctgagcttc
accggctccaccgaggtgggccgcatcctcatggcgcagtgcgcgcccacggtgaagaag
ctggcgctggaactcggcggcaacgcgcccttcatcgtcttcgacgacgccgatgtcgat
tcggccgtggaaggcgcgctggccagcaagtaccgcaacgcgggccagacctgcgtctgc
gccaaccgcttctacgtgcaggccggcgtgtacgacgagttcgtgaagaagttcgccgcc
aaggtcaaggccttcaaggtgggcaatggcttcgaggacggcgtggtgcagggcccgctg
atcgaggacgcggcggtggagaaggtgcagcgccacgtggatgacgccgtggccaagggc
ggcacggtggtcgccggcgggaagaagctgcagggccagttcttcgagcccacggtggtg
gccggcgccacgcccgacatgctgtgcgcgcgcgaggaaaccttcggccccttcgcgccg
gtgttcaagttcgagaccgagcaggaagccatcgacgccgcgaacaacaccgagttcggc
ctggccagctacttctacagccgcgacgtgggccgcatcttccgcgtgagcgaagcgctg
gagtacggcatggtcggcatcaacgtgggcatcctggcgaccgagcacgtgcccttcggc
ggcgtcaagcagtcgggcctgggccgcgagggctcgcaccatggcatggacgactacgtc
gagatcaaattcctctgcctgggcgatgtgctgaagtaa
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