Hydrogenophaga sp. PBC: Q5W_07130
Help
Entry
Q5W_07130 CDS
T04491
Name
(GenBank) pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
hyb
Hydrogenophaga sp. PBC
Brite
KEGG Orthology (KO) [BR:
hyb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hyb03009
]
Q5W_07130
03016 Transfer RNA biogenesis [BR:
hyb03016
]
Q5W_07130
Enzymes [BR:
hyb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
Q5W_07130
5.4.99.29 23S rRNA pseudouridine746 synthase
Q5W_07130
Ribosome biogenesis [BR:
hyb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Q5W_07130
Transfer RNA biogenesis [BR:
hyb03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
Q5W_07130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AOS78755
LinkDB
All DBs
Position
complement(1477272..1478204)
Genome browser
AA seq
310 aa
AA seq
DB search
MTHRPKNPLIPTRDGVSPSCVAVPFTKPLPWASALQFLSERLPVVSPAEWAQRMARGEVL
DDHGQAVTPDAPCTPGARLYYWRHLDDEAEIPFEPGILFQDEHLLVADKPHFMPVTPTGR
YVRHSLMVRLKQRTGIDTLNPIHRIDRETAGLVVFNLRPQDRNAYHALFRERAVVKTYEA
IAPHDPTLAMPLTRLSRIEEDVEAFFRMVEAEGEPNSETRIERLEVRAAWARYGLAPLTG
KRHQLRVHLDALGLPIAGDQFYPRVRRGPGEPEDFAEPLRLLARAIAFTDPVTGRPRRFE
SARALDWPPD
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
gtgacccaccgcccgaagaacccgctgatccccacgcgcgacggcgtatcgcccagttgc
gtggccgtgcccttcaccaagcccctgccctgggcctcggcactgcagttcctgagcgag
cggctgcccgtggtctcgcccgccgaatgggcgcagcgcatggcccgcggcgaggtgctg
gacgaccacggccaggcggtgacgcccgatgccccctgcacgcccggcgcgcggctctac
tactggcgccacctcgacgacgaggccgagatcccgttcgagcccggcatcctgttccag
gacgagcacctgctggtggccgacaagccgcacttcatgcccgtcacgcccacgggccgc
tacgtgcgccacagcctcatggtgcggctcaagcagcgcacgggcatcgacacgctcaac
cccatccaccgcatcgaccgcgagaccgccggtctggtggtgttcaacctgcgcccgcag
gaccgcaacgcctaccacgcgctgtttcgcgagcgtgcggtcgtgaagacctacgaggcc
atcgcgccgcacgaccccacgctggccatgccgctcacgcgcctcagccgcatcgaggaa
gacgtggaggccttctttcgcatggtggaggccgaaggcgagcccaacagcgagacgcgc
atcgagcggctggaggtgcgcgctgcctgggcgcgctatgggctggcgccgctcaccggc
aagcgccaccagttgcgcgtgcacctggacgcgctgggcctgcccatcgcgggcgaccag
ttctacccgcgcgtgcggcgcggccccggcgagcccgaggacttcgccgaaccgttgcgc
ctgctcgcgcgcgccatcgccttcaccgacccggtgacgggccggccgcggcggttcgag
agcgcgcgggcactggactggccaccggactga
DBGET
integrated database retrieval system