KEGG   Hydrogenophaga sp. PBC: Q5W_07130
Entry
Q5W_07130         CDS       T04491                                 
Name
(GenBank) pseudouridine synthase
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
hyb  Hydrogenophaga sp. PBC
Brite
KEGG Orthology (KO) [BR:hyb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hyb03009]
    Q5W_07130
   03016 Transfer RNA biogenesis [BR:hyb03016]
    Q5W_07130
Enzymes [BR:hyb01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     Q5W_07130
    5.4.99.29  23S rRNA pseudouridine746 synthase
     Q5W_07130
Ribosome biogenesis [BR:hyb03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Q5W_07130
Transfer RNA biogenesis [BR:hyb03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    Q5W_07130
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: AOS78755
LinkDB
Position
complement(1477272..1478204)
AA seq 310 aa
MTHRPKNPLIPTRDGVSPSCVAVPFTKPLPWASALQFLSERLPVVSPAEWAQRMARGEVL
DDHGQAVTPDAPCTPGARLYYWRHLDDEAEIPFEPGILFQDEHLLVADKPHFMPVTPTGR
YVRHSLMVRLKQRTGIDTLNPIHRIDRETAGLVVFNLRPQDRNAYHALFRERAVVKTYEA
IAPHDPTLAMPLTRLSRIEEDVEAFFRMVEAEGEPNSETRIERLEVRAAWARYGLAPLTG
KRHQLRVHLDALGLPIAGDQFYPRVRRGPGEPEDFAEPLRLLARAIAFTDPVTGRPRRFE
SARALDWPPD
NT seq 933 nt   +upstreamnt  +downstreamnt
gtgacccaccgcccgaagaacccgctgatccccacgcgcgacggcgtatcgcccagttgc
gtggccgtgcccttcaccaagcccctgccctgggcctcggcactgcagttcctgagcgag
cggctgcccgtggtctcgcccgccgaatgggcgcagcgcatggcccgcggcgaggtgctg
gacgaccacggccaggcggtgacgcccgatgccccctgcacgcccggcgcgcggctctac
tactggcgccacctcgacgacgaggccgagatcccgttcgagcccggcatcctgttccag
gacgagcacctgctggtggccgacaagccgcacttcatgcccgtcacgcccacgggccgc
tacgtgcgccacagcctcatggtgcggctcaagcagcgcacgggcatcgacacgctcaac
cccatccaccgcatcgaccgcgagaccgccggtctggtggtgttcaacctgcgcccgcag
gaccgcaacgcctaccacgcgctgtttcgcgagcgtgcggtcgtgaagacctacgaggcc
atcgcgccgcacgaccccacgctggccatgccgctcacgcgcctcagccgcatcgaggaa
gacgtggaggccttctttcgcatggtggaggccgaaggcgagcccaacagcgagacgcgc
atcgagcggctggaggtgcgcgctgcctgggcgcgctatgggctggcgccgctcaccggc
aagcgccaccagttgcgcgtgcacctggacgcgctgggcctgcccatcgcgggcgaccag
ttctacccgcgcgtgcggcgcggccccggcgagcccgaggacttcgccgaaccgttgcgc
ctgctcgcgcgcgccatcgccttcaccgacccggtgacgggccggccgcggcggttcgag
agcgcgcgggcactggactggccaccggactga

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