Hydrogenophaga sp. PBC: Q5W_07260
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Entry
Q5W_07260 CDS
T04491
Name
(GenBank) hypothetical protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
hyb
Hydrogenophaga sp. PBC
Brite
KEGG Orthology (KO) [BR:
hyb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hyb02044
]
Q5W_07260
02035 Bacterial motility proteins [BR:
hyb02035
]
Q5W_07260
Secretion system [BR:
hyb02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Q5W_07260
Bacterial motility proteins [BR:
hyb02035
]
Pilus system
Pilus assembly proteins
Q5W_07260
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
T4P_PilY1
Motif
Other DBs
NCBI-ProteinID:
AOS78779
LinkDB
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Position
complement(1502211..1506041)
Genome browser
AA seq
1276 aa
AA seq
DB search
MALTAALAALAMESHSQPSQQPLLVNTSGARPNLMVTLDNSGSMAFPYADGYSMYNNGGK
GTDAFAAQRSAEFNSLYYNPRITYRPRVDAQGKDLVPTDGIEFISNQSSAKFNYAVFAPV
NETLDESTPLIIKHSSFEKVTAQTPAGHQLAYSYPWEPQYPGIDYVPYHRVYRQDQPTLS
DEPAEPFTYAICAPHSGLAGCKSARLVTIDRTTTGAITLPTDSQRTDPGCTKEQCTADAE
RTNIMNWYRYYLTRMAATQTALGLAFTDKRLDNTLRIGYMRINFPDVAIALSPGTDVKRE
RVLRGVRLWTPGSTANQQFYDWLYGTVPMGGTPLHNSVNQVANYLRVPAGAKENPWASNP
ALPADADNLELACRRSYHVLFSDGAWSSDDAIKTQAATDDDNSTGPEFSRFPQTTGDDNE
PGKLKYEPKGIDTRRKWYTPFPSTGTRGLADLTAKYHWHLDLRPELNNQVATRAGQPVFW
QNMTTYTVGYLISPSGSNGAGGLTFQQIDQYRFDYLFKGFDNSAKPTWPGGDLAHDTDSG
ISSRRIDDFIHAGYTGGGRGFSVRSADDIKAVINNIVSAILSAMGKDAGVAVGGAGEVSP
GLQGQLKYHVEYSTADGEGDIKASVIDETGHAQTLAMDADGRPLKAPDNKTYWSASKQLP
APANRRIYSIRPDNTGFEFKGTLDSLPLATREALKRDDHGQRVPDDGRFVDYLRGVDPVL
DAKGQPLRLRLSGLGAIVNSPPLLADNAAGYMGYDLYGQVDGKNTYAAFRERVDNAPDTL
VAATNAGLVHLFDASNGKELGAFMPRRSMAWLIGKADPDAPFRYVLDGPITLHDVYHEGV
WRQIAVGTGGRGERLIYGLNIPLNGPQSRTPAANDFLWETGPELVNTEMFTLGHMTTPVR
SGQTDSGAWVMVTTTGHHNGVADGKNHGLLVLDAASGAVLRRLPLPDDYSAGRGMGAVSL
VRDQHQRIVAAYAGDANGQVWRFDLRGDPAQWRVAYGKPLFVTKHRRPVYGGPSWQAHPR
GGYIVIVGTGMLLDDSDLAAGNDPDSVYGIWDPTPRDKSSDGLGFEPILPSQLLEQAVES
QVTPDGQKNYFSVTRRAINWTHHRGWTLALGKAAPGERVIDQIVNISTSVSIPVVAIDRA
QHSTESCAADSAPPTQNYVLNALDGQGKPAFDIDGDGKLEPVAMVQVLSGGYSRGLSYHL
ASPSANATAKESVYRLNLGTQGGSQIDQNKPETPPACKDTKLTVYGIQEGKFDIELKCSK
GRLWSRQQYQLSQVPQ
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
ttggctctgacggccgccctggccgccctcgccatggaaagccactcgcaaccttcgcag
cagccgctgctggtgaacacctcgggtgcccggcccaatctcatggtcacgctggacaac
tcgggctcgatggcgtttccgtatgccgacggctactccatgtacaacaacggaggaaag
ggaacggacgcctttgcggcacagcgttcggcagagttcaattcgctgtattacaacccc
cgcatcacgtatcgccctcgcgtggacgcccaaggaaaagacctggtgccgactgatggc
atcgaattcatttccaaccaaagcagcgccaagttcaactacgccgtcttcgctccggtc
aacgagacgctggatgaatcgacaccgctgatcatcaaacacagcagtttcgaaaaggtg
acggcgcagacgcccgccggacaccaattggcctactcgtacccgtgggaacctcaatat
cctggcatcgactacgtcccgtatcaccgcgtctaccgccaagaccagccgaccctgtcg
gacgaacccgccgaacccttcacctacgcgatttgcgcgccccactcaggccttgcagga
tgcaagagcgcccgactggtgaccatcgacaggacaaccaccggcgcaataacgttgcca
accgatagccagcgaaccgatccaggttgcaccaaagagcagtgcacggcggacgccgag
cggaccaacatcatgaactggtaccgctactacctcacccgcatggcagccacacagaca
gccttgggcttggcattcaccgacaagcgcctggacaacaccttgcgcattggctacatg
cgcatcaatttcccggacgtggccatcgccttgtcgcctggcaccgatgtgaaacgcgaa
cgcgtgctgcgcggtgttcgactttggactccgggatcaacggccaatcagcagttttac
gactggctgtacggtaccgttcccatgggtggcacgccgctgcacaacagcgtgaaccag
gtagccaactacctgcgtgtgcccgctggcgccaaggagaatccctgggcgagcaatccc
gctctgcccgcagacgccgacaacctcgaactggcttgccgccgctcctatcacgtgctg
ttttcagatggcgcctggtcgagcgacgatgcgataaagacgcaggccgccacggatgac
gacaacagcacgggacccgagttcagccgtttccctcagacaactggcgacgacaatgag
ccgggaaaactcaagtacgagcccaaggggatcgacaccaggcgcaagtggtacacgccg
tttcccagcaccggcactagaggcctcgccgacctgacagcaaagtaccactggcacctg
gacctgcgacccgagttgaacaatcaggtggctacgcgcgccggtcaacccgtgttctgg
cagaacatgaccacctacacggtgggatacctcatcagcccttcaggtagcaacggggcc
ggcggcctcaccttccagcagatcgaccagtaccggttcgactacctgttcaagggtttc
gacaacagcgcgaagcccacatggcccggcggagacctcgcccacgacaccgactcggga
atatcttccaggcgcattgatgatttcatccacgcgggatacaccggcggtggacggggc
ttcagcgtgcgaagcgccgatgacatcaaggcggtgatcaacaacatcgtgtcggccatc
ctgtcggccatgggcaaagacgcgggtgtggcggttgggggtgcgggtgaggtgtcgcca
gggctgcagggacaactcaagtaccacgtcgaatacagcaccgccgacggcgagggcgac
atcaaggcttcggtcattgacgaaacggggcacgcacaaaccctcgccatggacgccgat
ggtcggccgctcaaggcacccgacaacaaaacctattggtcggccagcaagcagttgcct
gcaccggccaatcgccggatctacagcatccgccccgacaacaccggcttcgagttcaaa
ggcacccttgattcactaccgctcgcgacacgtgaagccctcaaacgcgacgaccatggc
cagcgcgtgcccgatgacggccggttcgtcgactaccttcgtggcgttgatcccgtactg
gacgccaaaggccagcccctgagactgcgcctgtccggcctgggcgccatcgtcaacagc
cctccattgcttgccgacaatgccgccggctacatggggtacgacttatacggccaggtc
gacggcaaaaacacctacgctgccttccgagaacgggtggacaacgcgcccgacaccttg
gtggcggccaccaacgccggcctggtgcacctgttcgacgccagcaatggcaaggaactc
ggcgccttcatgcctcggcgcagcatggcctggttgatcggcaaggccgatccggacgcg
ccgtttcgctacgtgctcgacgggcccatcaccttgcatgacgtctaccacgaaggcgtc
tggagacagatcgccgtgggcaccggcgggcgtggcgaacggctcatctacggcttgaac
attccgctcaatggccctcagtcacgtacaccggctgcgaatgactttctctgggaaacc
ggacctgagctcgtcaacacggagatgttcacgctgggacacatgaccacgcctgtccgc
agcggtcagaccgacagcggcgcttgggtaatggtcacgacgaccggccaccacaacggg
gtggcggatgggaaaaaccatggcttgctggtgctggacgccgccagtggcgcggtactg
cgcaggctcccgttgcctgacgactacagcgccggccgaggcatgggcgccgtcagtttg
gtgagggaccaacaccaacgcatcgtggccgcctacgctggcgatgccaacgggcaagtg
tggcgcttcgatctgcgaggcgaccccgcgcaatggcgcgtggcgtacggcaaacccttg
ttcgtcacgaaacaccgccgacccgtctacgggggaccgtcgtggcaagcccatccgcgc
ggcggctacatcgtgatcgtcggcacgggcatgctgctcgacgacagcgacctcgccgcg
ggcaacgaccccgacagcgtctacggcatctgggaccccactccacgggacaagtcctcg
gacggattgggcttcgagcccattctgccctcgcaactgcttgaacaagctgtggaatcc
caggtcacacccgatgggcagaagaactacttcagcgtcacgcggcgggcgatcaactgg
acgcaccaccggggctggacgcttgcactgggcaaagctgcgcctggcgagcgcgtcatc
gatcaaatcgtcaacatcagcaccagcgtgagtattcctgtcgtcgccatcgaccgggct
cagcattcgaccgagtcttgtgcagcagacagcgcgccgcccacccagaactacgtgctc
aacgcgctcgatgggcaggggaagcccgccttcgacattgacggcgacggcaagcttgaa
cctgtcgccatggtgcaggtgctctcgggaggctattcgagaggcttgtcctaccacctt
gccagcccctcggccaatgcaacagccaaggagtcggtctaccggctcaatctgggcacc
cagggcggctcccagatcgaccagaacaagccagagaccccgcccgcttgcaaggacacg
aagctcacggtctatggcatccaggagggcaagttcgacatcgagttgaaatgcagcaag
ggccggctctggagccgccagcagtatcaactgtcgcaggtgccgcaatga
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