Hydrogenophaga sp. PBC: Q5W_07325
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Entry
Q5W_07325 CDS
T04491
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hyb
Hydrogenophaga sp. PBC
Pathway
hyb00260
Glycine, serine and threonine metabolism
hyb00460
Cyanoamino acid metabolism
hyb00630
Glyoxylate and dicarboxylate metabolism
hyb00670
One carbon pool by folate
hyb00680
Methane metabolism
hyb01100
Metabolic pathways
hyb01110
Biosynthesis of secondary metabolites
hyb01120
Microbial metabolism in diverse environments
hyb01200
Carbon metabolism
hyb01230
Biosynthesis of amino acids
hyb01240
Biosynthesis of cofactors
hyb04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
hyb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Q5W_07325 (glyA)
09102 Energy metabolism
00680 Methane metabolism
Q5W_07325 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Q5W_07325 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Q5W_07325 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Q5W_07325 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Q5W_07325 (glyA)
Enzymes [BR:
hyb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Q5W_07325 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AOS78792
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Position
complement(1517798..1519042)
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AA seq
414 aa
AA seq
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MYDRRILIEQTDPELFAAIQAENARQERHIELIASENYASPAVMAAQGTQLTNKYAEGYP
GKRYYGGCEFVDVAEQLAIDRIKQLFGADAANVQPHCGASANEAVFLAFLKPGDTIMGMS
LAEGGHLTHGMALNMSGKWFNVVSYGLNAQEELDYDAMERKAHETKPKLIIAGASAYSLR
IDFARFAKVAKDVGAIFMVDMAHYAGLIAAGVYPNPVPHADVVTSTTHKSLRGPRGGFIL
MKAEHEKAINSAIFPGLQGGPLMHVIAAKAVAFKEALSPEFKVYQQQVAKNAQIVAETLT
QRGLRIVSGRTESHVMLVDLRAKGITGKEAEAVLGEAHMTINKNAIPNDPEKPMVTSGVR
IGTPAMTTRGFKDEEARLTANLVADVLDNPRDPANIAAVREKVNALTARFPVYR
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaccgccgaatcctcatcgaacagaccgatcccgagctgtttgccgccatccag
gccgaaaacgcccgccaggaacgccacatcgagctcattgcgagcgagaactacgccagc
ccggccgtgatggccgcgcagggcacccagctcaccaacaagtacgccgagggttacccc
ggcaagcgctactacggcggctgtgaattcgtcgacgtggccgagcagctcgccatcgac
cgcatcaagcagctcttcggcgccgacgccgccaacgtgcaaccgcattgcggcgcgtcc
gccaacgaggctgtcttcctcgccttcctcaagccgggtgacactatcatgggcatgagc
ctggccgaagggggtcacctcacccacggcatggcgctcaacatgagcggcaagtggttc
aacgtcgtgtcctacggcctcaacgcccaggaagagctcgactacgacgccatggagcgc
aaggctcacgagaccaagcccaagctcatcatcgcgggcgcctcggcctacagcctgcgc
atcgacttcgcgcgcttcgccaaggtggcgaaagacgtgggcgccatcttcatggtggac
atggcgcactacgccggcctcatcgctgcgggggtgtaccccaaccccgtgccgcacgcc
gacgtggtcacctccaccacccacaagagcctgcgcggcccgcgcggcggcttcatcctc
atgaaggccgagcatgagaaggccatcaacagcgccatcttccccggcctgcagggtggc
ccgctgatgcacgtcatcgcggccaaggcggtggccttcaaggaagcgctctcgcccgag
ttcaaggtctatcagcaacaggtggccaagaacgcccagatcgtggcggagacgctcacc
cagcgcggcctgcgcatcgtcagcggacgcaccgaaagccacgtgatgctggtggacctg
cgcgccaagggcatcaccggcaaggaagccgaggctgtgctgggcgaggcgcacatgacc
atcaacaagaacgccatccccaacgacccggagaagccgatggtgaccagcggtgtgcgc
atcggtaccccggccatgaccacgcgcggcttcaaggacgaggaagcgcgcctgaccgcc
aacctggtggccgacgtgctggacaacccgcgcgacccggccaacatcgctgcggtgcgc
gagaaggtcaacgccctgaccgcgcgcttcccggtctaccgctga
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