Hydrogenophaga sp. PBC: Q5W_07990
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Entry
Q5W_07990 CDS
T04491
Name
(GenBank) DNA polymerase III, subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hyb
Hydrogenophaga sp. PBC
Pathway
hyb03030
DNA replication
hyb03430
Mismatch repair
hyb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Q5W_07990
03430 Mismatch repair
Q5W_07990
03440 Homologous recombination
Q5W_07990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyb03032
]
Q5W_07990
03400 DNA repair and recombination proteins [BR:
hyb03400
]
Q5W_07990
Enzymes [BR:
hyb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Q5W_07990
DNA replication proteins [BR:
hyb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Q5W_07990
DNA repair and recombination proteins [BR:
hyb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Q5W_07990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
DNA_pol3_tau_5
RuvB_N
AAA_22
AAA_18
AAA_14
AAA_19
AAA_30
DUF3646
AAA_5
SKI
Rad17
Adeno_E1B_55K_N
TsaE
AAA_2
AAA_16
nSTAND3
Herpes_Helicase
AAA_28
RCF1-5-like_lid
Motif
Other DBs
NCBI-ProteinID:
AOS78900
LinkDB
All DBs
Position
1707564..1709537
Genome browser
AA seq
657 aa
AA seq
DB search
MSYVVLARKYRPRNFREMVGQGHVVQALANALTSQRLHHAYLFTGTRGVGKTTVSRILAK
SLNCTGPDGQGGITAEPCGVCQACTDIDAGRFVDYTELDAASNRGVDEVQSLLEQAVYKP
VQGRFKVFMIDEVHMLTNTAFNAMLKTLEEPPEYLKFVLATTDPQKVPVTVLSRCLQFNL
RPMAPETVAEHLQQVLQAEGVTAEPQALRLLSRAARGSMRDALSLTDQAIAFGGGQLMEA
PVRQMLGAVDRSHVLRLIDALARADGASVVETVNALRVNGLSAASTLEEMTGLLQRMAVL
QSVPDAAATDDDPDTPEIARLAAALPPDETHLLYSLCLHGRTELGLAPDEYAALTMVLLR
LLAFKPSGAAEKKTLKPAEARPATAPAPVAAIAPAQAPVRAPVASPNAAPAPRAAAPAPL
VAPPAPAAASQRPAPSPSPTPLATAAAAAPAQARQPSEPEPFDGPPIDDAPWPEPDDDLP
PWDPEPAPAMSRPAAAPAPAAPVVRIPVRDPGAPGRLDQPRPPSAPLQPTPEGDFWAGVV
QQMVDSGAIAALTRELALQSQLVSRDGSRWLLRIERETLAQGSNRDRLTAALHTAGRAVE
LVLENGAVTDSPARRAAAEAERRQREAEQQILGDPFVQAMMRDFGGTIVPGSLKAIT
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacgtcgtcctcgcccgcaagtaccgcccgcgcaatttccgcgagatggtcggc
cagggccacgtggtgcaggccctcgcgaacgcgctcaccagccagcgccttcaccacgcc
tacctgttcaccggcacgcgcggcgtgggcaagaccacggtctcccgcatcctggccaaa
tcgctcaactgcaccgggcccgacgggcagggcggcatcaccgccgagccctgcggcgtg
tgccaggcttgcaccgacatcgacgccggccgcttcgtggactacaccgagctcgacgcc
gcctccaaccgcggcgtggacgaggtccagtcgctgctcgagcaggcggtctataagccg
gtgcagggccgcttcaaggtgttcatgatcgacgaggtccacatgctcaccaacaccgcg
ttcaacgcgatgttgaagacgctggaggaaccgcccgagtacctcaagttcgtgctcgcc
accaccgacccgcagaaggtgccggtgacggtgctgtcgcgctgcctgcagttcaacctg
cgccccatggcccccgagacggtggcggagcacctgcagcaggtgctgcaggccgagggc
gtgacggccgagccgcaggccctgcgcctgctgtcgcgcgccgcgcgcggctccatgcgc
gacgcgctgtcgctcaccgaccaggccatcgccttcggcggcggccagttgatggaagcg
cccgtgcgccagatgctgggcgcggtggaccgcagccacgtgctgcgcctgatcgacgcg
ctggcgcgcgccgacggcgcgagtgtggtggagacggtgaacgcgctgcgcgtgaacggc
ctgagcgccgcctcaacgctggaggaaatgacgggcctgctgcagcgcatggccgtgctg
cagagcgtgcccgacgcggccgccaccgacgacgaccccgacacgcccgagatcgcgcgc
ctggccgcggccctgccgcccgacgagacgcacctgctctacagcctgtgcctgcacggc
cgcaccgaactgggcctggcgcccgacgagtacgcggcgctgaccatggtgttgctgcgg
ttgctggcgttcaagccctcgggcgcggcggaaaaaaaaactctgaagcccgctgaggcg
cggcccgcgacggcaccggcaccggtcgcggcgattgcgcccgcgcaagctcccgtgcgc
gccccggtcgcctcgcccaacgctgcgcccgcccccagggcggccgcaccagcgcccttg
gtggccccgcccgcacccgcggcagcgtcccagcggccggccccaagcccgtcgccaacc
ccgctggccaccgctgccgcagccgctcccgcccaggcccgccagcccagtgagcccgag
cccttcgacggcccaccgatcgacgacgccccctggccagagcccgacgacgacctgccg
ccctgggacccggaacccgcgcccgccatgtcccggcccgccgctgcaccggcgcccgcc
gcgccggtggtgcgcatccccgtgcgcgaccctggcgcgccgggccggctcgaccagccc
cgcccacccagcgccccgctgcagcccacgcccgaaggcgatttctgggccggcgtggtg
caacagatggtggacagtggcgccatcgccgcattgacgcgcgaactcgcgctgcagtcg
caactggtgtcgcgcgatggatcgcgctggctgcttcgcatcgaacgcgagacgcttgcg
cagggcagcaaccgcgaccgcctcacggccgcgctgcacacggcgggccgcgcggtcgag
ctcgtgctggaaaatggcgcggtcaccgattcgcccgcgcgccgagccgccgccgaggcc
gagcgccgccagcgcgaggccgagcagcagatcctcggcgatccctttgtgcaggccatg
atgcgcgacttcggcggcacaatcgtgcccggctcgctcaaagcgataacctga
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