Hydrogenophaga sp. PBC: Q5W_11410
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Entry
Q5W_11410 CDS
T04491
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
hyb
Hydrogenophaga sp. PBC
Pathway
hyb00061
Fatty acid biosynthesis
hyb00071
Fatty acid degradation
hyb01100
Metabolic pathways
hyb01212
Fatty acid metabolism
hyb02024
Quorum sensing
hyb04146
Peroxisome
Module
hyb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hyb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Q5W_11410
00071 Fatty acid degradation
Q5W_11410
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Q5W_11410
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q5W_11410
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hyb01004
]
Q5W_11410
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hyb04147
]
Q5W_11410
Enzymes [BR:
hyb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Q5W_11410
Lipid biosynthesis proteins [BR:
hyb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Q5W_11410
Exosome [BR:
hyb04147
]
Exosomal proteins
Exosomal proteins of breast milk
Q5W_11410
Exosomal proteins of breast cancer cells
Q5W_11410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DAPG_hydrolase
Motif
Other DBs
NCBI-ProteinID:
AOS79526
LinkDB
All DBs
Position
complement(2423944..2425485)
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AA seq
513 aa
AA seq
DB search
MTRSVHVGTRSRDTTQVEDRAARAATGFVAAGGRAGDAVALLLRNDFAFLEAGAGAALLG
AYAVPLNWHLAPSEIDYVVHDCDAKVLVVHDDLLRLVDVQGLRAEGRTLVVVPTDPGIRR
AYQVPEDAASMPPDLTLWDHWLARHEPWRGVPGTPVESVIYTSGTTGRPKGVKRLPATPE
QMKRIEAMRAKVYGLVPGIRLIVPAPMYHAAPNVFASRGLKVADRLVLMEKFDAEELLRL
IEAHRATTLVMVPTMFVRLLRLPEAVRQRYDLSSLQQVYHAAAPCPPEVKAEMIAWWGPI
INEWYGTTESSVVTWCNSEQWLSHRGTVGRPIDGARVEIVGEDGALLPPGEPGEIYVGLD
FYPDFTFHKREDERRQIGRNGLITGGDVGYLDQDGFLYICDRKRDMIISGGVNIYPAEIE
AALLESTEVQDCAVFGVPDPEYGEAVLALVVRAPGVSEAGFDQRLRALLGQRLARYKIPR
TIEIRDALPRDDAGKLIKRRLREPYWQGIERRI
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgacacgttcggtacacgtcgggacacgaagccgcgacaccacgcaagttgaagatcgc
gccgcgcgcgcggccacaggattcgtcgccgcgggggggcgagcgggcgacgcggtggcc
ctgctgcttcgcaacgactttgcctttctggaagcgggggccggcgccgccttgttgggc
gcctacgcggtgccactcaactggcacctggcgcccagcgagatcgactacgtcgtccac
gattgcgacgccaaggtgctggtggtgcacgacgacctcttgcgactggtggacgttcag
gggcttcgggccgaaggacgcacgctggtggtggtgccgaccgaccccgggatccgtcgc
gcctaccaagtgccggaggacgcggcttccatgccaccggacctcacgctctgggatcac
tggctggcccggcacgagccctggcgcggcgtgcctggcacaccggtggaaagcgtgatc
tacacctcgggcaccaccggccgccccaagggcgtcaagcgcttgcccgcgacgccggag
cagatgaaacgcatcgaggccatgcgtgccaaggtctatgggctggtgcccggcatccgg
ctgatcgtgccggcaccgatgtaccacgcggccccgaacgtgttcgcctcgcgcgggctg
aaggtagcggaccgcctggtgctgatggagaagttcgatgccgaagaactgctgcgcctg
atcgaagcgcatcgtgccaccaccctggtgatggtgcccaccatgttcgtgcgcctgctg
cgcctgcccgaggcggtgcgacagcgctacgacctgagttccctgcaacaggtctaccac
gcggccgctccctgtcctccggaggtgaaggccgagatgatcgcctggtgggggccgatc
atcaacgagtggtacggcaccaccgagtccagcgtggtcacctggtgcaacagcgagcaa
tggctgagccaccgcggcacggtggggcgccccatcgacggcgcgcgtgtcgagatcgtc
ggcgaggacggtgccttgttgccgccgggtgagcccggcgagatctacgtcgggctcgac
ttctaccccgacttcactttccacaagcgcgaggacgagcgccgccagatcggccgcaac
ggcctgatcaccggcggtgacgtcggctacctcgaccaggacggcttcctgtacatctgc
gaccgcaagcgggacatgatcatctcgggcggcgtcaacatttatcccgcggagatcgag
gctgccctcctggaatcgaccgaggtccaggactgcgccgtcttcggtgtgcccgacccg
gaatacggcgaggccgtgctggcgctcgtggtgcgtgcgcccggcgtgtccgaggccggg
ttcgatcagcgcctgcgcgccctgctggggcagcggctcgcccgctacaagatcccccgc
accatcgagatccgcgacgcgctgccgcgcgacgatgcgggcaagttgatcaagcgccgt
ttgcgagagccctactggcagggcatcgaacgccgcatctag
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