Hydrogenophaga sp. PBC: Q5W_12180
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Entry
Q5W_12180 CDS
T04491
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
hyb
Hydrogenophaga sp. PBC
Pathway
hyb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hyb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Q5W_12180
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hyb01007
]
Q5W_12180
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hyb03016
]
Q5W_12180
Enzymes [BR:
hyb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
Q5W_12180
Amino acid related enzymes [BR:
hyb01007
]
Aminoacyl-tRNA synthetase
Class II (U)
Q5W_12180
Transfer RNA biogenesis [BR:
hyb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Q5W_12180
Prokaryotic type
Q5W_12180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
tRNA_bind
FDX-ACB
B5
Motif
Other DBs
NCBI-ProteinID:
AOS79667
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All DBs
Position
complement(2586542..2588962)
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AA seq
806 aa
AA seq
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MQFPESWLRSFCNPPLTSQQLADTLTMAGLEVEELRPVAPPFSKVVVGEIKSATQHPNAD
RLRVCEVDVGQGALLNIVCGAPNARVGIKVPCAQVGAVLPPGEDGKPFTIKLGKLRGVES
QGMLCSARELQLSESHEGLLELPVDAVVGRDIREQLSLDDMLFTLKLTPNLAHCLSVYGI
AREVAAITGAPLQSPAFPAVPVSLNDKLPVRIEAPDLCGRFSGRVVRGVNTQAQTPAWMV
DRLARCGQRSVTALVDISNYVMFELGRPSHIFDLDKIHGGLQVRWGREGESLKLLNGNTI
TVDAGVGVIADEQAVESLAGIMGGDATAVSDDTNNIYIEAAFWWPKAVAGRSRRYNFSTD
AGHRFERGVDPSTTVEHIERITQLVLEICGGQAGPMDDQITQLPQAKPVTLRVARAAKVI
GMPITQAQCVDSLRRLGLPLEEGQGTVTVTPPPYRFDLLIEEDLIEEVVRLVGYEQLPTT
PPLAPITAKIRPEARRGAFAVRRQLAQLGYQETINFSFVEERWERELAGNVDPIKLLNPI
ASQMNVMRSSLIGSLVAVCKFNLDRRAERVRLFEIGRVFRKDAAVKDSDTSVAGFEQPMR
VAGLAGGPLNALQWGESDRTADFFDAKGDVEALLAPRRAEFRVAEHPAMHPGRCASVWLD
GHCIGHVGELHPRWRQAYELPQAPVLFELELDAVLAWPVPEFHAVSRHQPVQRDLALVVD
ESVSHDAVMAAIRAAGNPWLQDAVLFDVYRPKKGVVVPGLSEHEKSLAVRLVMNRDDATL
ADEQIEAAVQQTLASLHERVKARLRA
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgcaattccccgaatcctggctgcgcagcttctgcaatccgccgctgacgagccagcag
ctcgccgacaccctcaccatggccgggctggaggtcgaagaactccggcccgtcgcgcca
ccgttctcgaaggtggtggtgggcgaaatcaagtccgccacgcaacaccccaacgccgac
cgcttgcgcgtgtgcgaggtcgatgtcgggcagggtgccctgctgaacatcgtgtgtggc
gcgccgaacgcgcgcgtgggcatcaaggtgccctgcgcccaggtgggcgcggtgctgccg
cccggtgaagacggcaagcccttcaccatcaagcttggcaagctgcgcggcgtggaaagc
cagggcatgctgtgctcggcgcgcgaactgcagctctccgagagccatgaaggcttgctc
gagctgcccgtcgatgcagttgtggggcgtgacattcgcgagcaactgtcgcttgacgac
atgctgttcacgctaaagctcacgcccaacctggcgcactgcctgagcgtgtacggcatc
gcgcgcgaggtggccgccatcacgggtgcaccgctgcagtcgcctgcgttccctgccgtg
ccggtgtcgctgaacgacaagctcccggttcgcatcgaagcgcccgacctgtgcgggcgc
ttcagtggtcgcgtggtacgaggcgtgaatacccaggcgcagacgccggcctggatggtc
gatcgcctggcgcgctgcggccagcgcagtgtcacggctctggtggacatctccaactac
gtgatgttcgagctgggccggccttcgcacatcttcgacctcgacaagatccacggcggc
ctgcaggtgcgctggggccgcgagggcgaatcgctcaaactgctcaatggcaacaccatc
acggtcgatgctggcgtgggcgtgatcgccgacgagcaagccgtcgagtcgctcgcgggc
atcatgggtggcgacgccaccgccgtgtccgacgacacgaacaacatctacatcgaagcc
gccttctggtggccgaaagcggtggccgggcgctcgcgccgctacaacttcagcaccgac
gcgggccaccggttcgagcgcggcgtggacccttccaccaccgtcgagcacatcgagcgc
atcacgcaacttgtgctggagatctgtggcggccaggccggccccatggacgaccagatc
acccagttgccccaagccaaaccggtcacgctgcgcgtggcgcgcgcggccaaggtgatt
ggcatgccgatcacgcaggcgcagtgcgtggattcgctgcgccgcctgggcctgccgctc
gaagaggggcagggcacggtcaccgtgacaccgccgccgtaccgattcgacctgctgatc
gaggaagacctgatcgaggaggtggtgcgcctggtgggctacgagcagttgcccaccacg
ccgccgctggcgcccatcaccgccaagatccggcccgaggcgcgccgaggggccttcgcc
gtgcgtcgccagctcgcgcaactgggctaccaggaaacgatcaacttcagcttcgtggag
gagcgctgggagcgcgagctcgcgggtaacgtcgacccgatcaagctgctcaaccccatc
gcgagccaaatgaacgtgatgcgctcttcgctgatcggcagcctggtggcggtgtgcaaa
ttcaacctcgaccgccgcgccgagcgcgtgcgtctgttcgagatcggccgcgtgttccgc
aaggacgcggcggtgaaggacagcgacaccagcgtggcggggttcgaacagcccatgcgc
gtagctggcctcgcgggtgggcccttgaacgccttgcaatggggcgagagcgaccgcacg
gccgacttcttcgacgccaagggcgacgtggaagccctgctggcgccgcgccgcgccgag
ttccgcgtggcggagcaccccgccatgcacccgggccgttgcgcgtccgtgtggctcgac
ggccattgcatcggtcacgtgggtgaactgcacccgcgctggcgccaggcctacgaactg
ccgcaggcgcccgtgctgttcgaattggaactcgatgccgtgctggcttggcccgtgcct
gagtttcacgccgtcagccgccaccagccggtgcagcgtgacctggcgctggtggtggac
gagtcggtgtcgcacgacgccgtgatggccgccatccgcgccgcgggcaacccctggctg
caggacgccgtgctgttcgatgtctaccgccccaagaagggcgtggtggtgcccggcctg
tccgagcacgagaagagcctggccgtgcggctcgtcatgaaccgcgacgacgctacactg
gccgacgaacagatcgaagccgccgtgcaacagacgctcgcgtccctgcacgagcgcgtg
aaggcccgcttgcgcgcctga
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