Hydrogenophaga sp. PBC: Q5W_12235
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Entry
Q5W_12235 CDS
T04491
Name
(GenBank) oxygen-independent coproporphyrinogen III oxidase
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
hyb
Hydrogenophaga sp. PBC
Pathway
hyb00860
Porphyrin metabolism
hyb01100
Metabolic pathways
hyb01110
Biosynthesis of secondary metabolites
hyb01240
Biosynthesis of cofactors
Module
hyb_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
hyb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Q5W_12235
Enzymes [BR:
hyb01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
Q5W_12235
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
HemN_C
ADH_zinc_N_2
Motif
Other DBs
NCBI-ProteinID:
AOS79676
LinkDB
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Position
complement(2600225..2601622)
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AA seq
465 aa
AA seq
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MPQGLAVSHAIPDDLLRRFDVPGPRYTSYPTADRFVEAFTEQDYRLALGQRRAGSMALPL
SLYVHIPFCESVCYYCACNKVITKHHSRGAEYLRHLSRELDLQIEHLGAGQSVSQLHLGG
GTPTFLSDTELEDLMAMLRRHFALVPGGEYSIEVDPRTVDAQRLRTLHRLGFNRLSFGVQ
DFDPAVQKAVHRVQPAEQVFALMDAARRIGFESVNVDLIYGLPLQTPESFRRTLAQLQAL
RPDRVALYAYAHLPARFKPQRRIVAAELPGAADKLAMLSASLDILRDAGYVHVGMDHFAL
PDDALAVAKRQGRLHRNFQGYSTQPDCDLIALGVSAIGRVGATYSQNAKTLDEYVDLLDQ
GRLPIVRGLALTRDDLVRRAVIMSLMCQGELLFESVDQGQLIDSRRYFANELQALEPFVK
EGLVTLDDQGVHVTETGWYLIRAIAMLFDRHLRADQDRARFSKIL
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgccacaaggacttgccgtgagccacgcgatccccgacgacctgctcaggcgtttcgac
gtcccggggccccgctacacctcctaccccacggccgaccgcttcgtggaagccttcacc
gagcaggactaccgccttgcactgggccagcgccgcgcgggctccatggccctgccactg
tcgctgtacgtgcacatcccgttctgcgaatcggtctgctactactgtgcgtgcaacaaa
gtcattacaaagcaccactcgcgcggcgccgaatacctgcgccacctctcgcgtgagctg
gaccttcagatcgagcacctgggcgccgggcagtcggtgtcgcaactgcacctgggcggg
ggcacgcccacgttcctgagcgacaccgaactcgaagacctgatggccatgctgcggcgc
cacttcgcgctggtgccgggtggggagtactcgatcgaggtggacccgcgcaccgtggac
gcgcagcggctgcgcacgctgcaccgcctgggcttcaaccgcctgagcttcggcgtgcag
gatttcgaccccgctgtacaaaaggccgtgcaccgcgtccagcccgccgagcaagtcttc
gccctgatggacgcggcgcggcgcatcggcttcgagtcggtcaacgtggacctgatctac
ggcctgccgctgcagacgccagagtccttccggcgcacgctggcgcaattgcaggccctg
cggcccgaccgcgtggcgctctacgcctacgcgcacctgccggcgcgcttcaagccgcag
cggcgcatcgtggcggccgagttgcccggcgccgccgacaagctcgccatgctgtcggcc
tcgctcgacatcctgcgcgacgcgggctacgtgcatgtgggcatggaccacttcgcgctg
cccgatgacgcattggccgtggccaagcgccagggccggctgcaccgcaacttccagggc
tacagcacccagccggactgcgacctcatcgcgctcggtgtctcggccatcggccgcgtc
ggcgccacctacagccagaacgccaagaccctggacgagtacgtggacctgctcgaccag
gggcgcttgcccatcgtgcgcggcctggcgctcacgcgcgacgacctggtgcgccgcgcg
gtgatcatgtcgctgatgtgccagggcgaactgctgttcgaaagcgtcgaccaaggccag
ttgatcgacagccgccgttacttcgcgaacgagttgcaggcgctggagcccttcgtgaaa
gaaggcctggtcaccctggacgaccagggcgtgcacgtcaccgaaaccggctggtacctg
atccgcgcgatcgccatgctgttcgaccgccacctgcgcgccgatcaggaccgcgcgcgt
ttctcgaagatcctgtga
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