Hydrogenophaga sp. PBC: Q5W_13070
Help
Entry
Q5W_13070 CDS
T04491
Name
(GenBank) hypothetical protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
hyb
Hydrogenophaga sp. PBC
Pathway
hyb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hyb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q5W_13070
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hyb02000
]
Q5W_13070
Transporters [BR:
hyb02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Q5W_13070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Phage_portal
Motif
Other DBs
NCBI-ProteinID:
AOS79830
LinkDB
All DBs
Position
complement(2760732..2762306)
Genome browser
AA seq
524 aa
AA seq
DB search
MMLRLRRGLLLALSLLAIGTAHAVPFKWASQDDATTLDPHAFNHGMTLTLLNHVYEGLVR
RDKDMRIEPALAQRWEQPTPTTWVFHLRPGVRFHDGTPLAAADVVFSIQRAMHPDSDMKV
FAASIGSVKAQGPATVVIETEFANAALLQSLPELRVMSKAWSEGNGATAPANMRQKQENA
ATRQANGTGPFRVASREPDVKTVLERNEQWWGKHTTNITRAELLKVSSDATRVAALLSGE
LDFAYPIPLQDIARVESNPRFKVKQGAEIRVMFLSLDQGSDELRYASVKGRNPFKDQRVR
QAFYQAIDTEAIRSRIMRNSVRPTGILIATGVNSVDPAATQRQYAYDPEAARRLLAQAGY
ENGFELTLDCPNDRYVNDEQVCVAVAAMLSRVNVKVAVNPLPAARFFQKVGAGDSSFNFF
GYTPSNIDAYNAMDVIMATRQGGSGQWNVGRYSNPQVDALIKQVLSEMDARKRTELVTQA
LALHKRDVGHIPLYQQGLAWGMRQNVDAALQIDNRVNLNYITVK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgatgcttcgactccgccgtggtctcctgctggccttgtctcttctggccatcggcacc
gcccacgccgttcccttcaaatgggcttcgcaggacgacgcgaccacgctcgacccgcac
gccttcaatcacggcatgaccttgacgctgctcaaccacgtctacgagggcctggtgcgg
cgagacaaggacatgcgcatcgagcccgcgctggcgcaacgctgggagcaacccacgccc
accacctgggtgttccatctgcgcccgggcgtgcggttccacgacggcacgccactggcg
gcggccgacgtggtgttctccatccagcgcgccatgcacccggattcggacatgaaggtc
tttgccgcctcgattggctcggtcaaggcccaggggccggccacagtggtcatcgaaaca
gagtttgcgaacgccgcgctgcttcagtcgctgcccgagctgcgcgtcatgtcgaaggcc
tggagcgagggcaatggcgcaaccgcgcctgcgaacatgcggcagaagcaggagaacgcc
gcgacgcggcaggccaatggcacgggtccgttcagggtcgcaagccgcgaacccgacgtc
aagaccgtactggagcgcaacgagcagtggtggggcaagcacaccaccaacatcacgcgc
gccgagttgctgaaggtgagctcggacgccacgcgcgtggccgccttgctgtcgggcgag
ctcgactttgcctatccgatcccgctgcaggacatcgcgcgcgtcgagagcaacccgcgc
ttcaaggtgaagcaaggtgccgagatccgggtgatgttcctgtcccttgaccagggcagc
gatgaactccggtatgcaagcgtcaaggggcgaaaccccttcaaggaccaacgcgtgcgg
caggccttctaccaggccatcgacaccgaggccatccgttctcgcatcatgcgcaacagc
gtcagacccacgggcattctcattgccaccggcgtgaactccgtcgatcccgccgccacc
cagcgccagtacgcctacgaccccgaggccgcgcgccgcctgctcgctcaggccggttac
gagaatgggttcgagctcacgctcgactgccccaacgaccgctacgtcaacgacgaacag
gtctgcgtggccgtggcggccatgctgtcgcgtgtcaacgtgaaggtggcggtgaatccc
ttgccggcggcccgcttctttcagaaggtcggcgcgggcgactccagcttcaacttcttc
ggctacacgcccagcaacatcgacgcctacaacgcaatggacgtgatcatggcgacccgc
cagggcggctcggggcagtggaacgtcgggcgctactcgaacccgcaggtggacgcgctg
atcaagcaagtgctcagcgaaatggacgctcgcaagcgcaccgaactcgtgacgcaggcg
ctggcgcttcacaagcgcgacgtcgggcacataccgctctaccagcaggggctcgcgtgg
ggcatgcgccagaacgtcgatgccgcgcttcagatcgacaaccgtgtcaacctgaactac
atcacggtgaagtga
DBGET
integrated database retrieval system