Hydrogenophaga sp. PBC: Q5W_13185
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Entry
Q5W_13185 CDS
T04491
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
hyb
Hydrogenophaga sp. PBC
Brite
KEGG Orthology (KO) [BR:
hyb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyb03032
]
Q5W_13185
03036 Chromosome and associated proteins [BR:
hyb03036
]
Q5W_13185
03400 DNA repair and recombination proteins [BR:
hyb03400
]
Q5W_13185
DNA replication proteins [BR:
hyb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Q5W_13185
Chromosome and associated proteins [BR:
hyb03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Q5W_13185
DNA repair and recombination proteins [BR:
hyb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Q5W_13185
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
ALF
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AOS79849
LinkDB
All DBs
Position
complement(2784240..2784512)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELVEHIAKHADISKAAATRALDSTIAAIRTTLKKGGTVSLVGFGSFAVSKRPARKG
RNPRTGAEIKIKAAKVPKFRPGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagaccgaactcgtcgaacacatcgccaagcacgccgacatctccaaggccgcc
gcgacacgtgcactcgactccaccatcgccgccatccgcaccacgctcaagaagggcggc
accgtttccctggtgggcttcggctcgttcgccgtgagcaagcgccccgcccgcaagggc
cgcaacccgcgcacgggcgccgagattaaaatcaaggccgccaaagtgccgaagttccgc
cccggcaaggcactgaaggacgcggtcaactga
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