Hydrogenophaga sp. PBC: Q5W_14805
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Entry
Q5W_14805 CDS
T04491
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
hyb
Hydrogenophaga sp. PBC
Pathway
hyb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Q5W_14805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyb03400
]
Q5W_14805
DNA repair and recombination proteins [BR:
hyb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Q5W_14805
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Q5W_14805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
AOS80144
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Position
3136117..3136911
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AA seq
264 aa
AA seq
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MSALRRVADESAYVLHRYDWSETSLVLEVFTRYHGRIALVAKGVKRPTSQFRPVLLPLQP
LQLSWSGDAEVRTLKAAHWVGGHVMPTGEALIAGSYLNELLVKLLARDDPYPRLFDWFAT
AVHTLADQPDARTVVLRAFELLMLREIGLLPDLVREGSTLAPLSEGERYVLQAESGLRVA
HEDDHHALDAARWRDLQQALDDPAPFVPVLRVCAEIAPTLRIPLRNLLHYHGGVRVFRTR
QLMLDVQAMRRRRGHAPDAASTDS
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgccttgcgccgcgtcgccgacgagtccgcctacgttctgcaccgctacgactgg
agcgagaccagcctcgttctcgaggtattcacccgctaccacggccgcatcgccctggtg
gccaagggcgtcaagcggcccacctcgcagttccgcccggtgctgctgccattgcagccc
ctgcagctgagctggagcggcgacgccgaggtgcgcacgctcaaggctgcgcactgggtg
ggtgggcatgtcatgccgacgggcgaagccctcattgcgggcagctacctcaacgaactg
ctggtgaagctgctggcgcgcgacgacccgtacccgcgcctgttcgactggttcgccacc
gccgtacacaccctggccgaccagcccgacgcccgcaccgtggtgctgcgcgccttcgag
ctgctgatgctgcgcgagatcggtctgctgcccgacctggtgcgtgagggctcgacgctg
gcgccgctgagcgagggcgagcgctacgtgctgcaggccgagtcgggcctgcgcgtggcg
cacgaggacgatcaccacgcgctggacgccgcccgctggcgcgacctgcaacaggccctg
gacgaccccgcgcctttcgtgccggtgctgcgcgtgtgcgccgagatcgcgccgaccctg
cgcatccctctgcgcaacctgctgcactaccatggtggcgtgcgcgtgtttcgcacgcgc
cagctcatgctcgatgtgcaggccatgcgccgccgccgcgggcatgcccccgacgccgct
tcaaccgattcctga
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