Hydrogenophaga sp. PBC: Q5W_14850
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Entry
Q5W_14850 CDS
T04491
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hyb
Hydrogenophaga sp. PBC
Brite
KEGG Orthology (KO) [BR:
hyb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hyb03016
]
Q5W_14850
Enzymes [BR:
hyb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Q5W_14850
Transfer RNA biogenesis [BR:
hyb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Q5W_14850
Prokaryotic type
Q5W_14850
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
PD40
Motif
Other DBs
NCBI-ProteinID:
AOS80153
LinkDB
All DBs
Position
complement(3143587..3144375)
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AA seq
262 aa
AA seq
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MHRIAVGVSFNGRAYDGWQSQPSGNTVQDKLEDALSRFSALPAVNTLCAGRTDAGVHGLM
QVVHFDTPLERAEYAWVRGTNSFLPPDIAVQWAREVPAAFHARASAVARRYAYVLLESPV
RPSVEQGQVGWVFRPLDADAMRQAAKHLLGEHDFTSFRASQCQAHTPVKTLRRIEIARRG
AYWRFEFEANAFLHHMIRNIMGCLIAIGSGHQPPGWMAEVLAARSRDAAAPTFSPDGLYF
LGPVYDAAWGLPERTPAFDWLP
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgcatcgcggtgggcgtgagctttaacggccgggcgtacgacggctggcaaagc
cagcccagcggcaacacggttcaggacaagctggaagacgcgctctcgcgcttcagcgcc
ctgcccgccgtgaacacgctgtgcgccggccgcaccgacgccggcgtgcacggcctcatg
caggtggtgcacttcgacacgccactggagcgggccgagtacgcctgggtgcgaggcacc
aatagctttctgccgcccgacatcgccgtgcagtgggcgcgtgaggtgcctgcagctttc
cacgcacgtgccagcgccgtcgcccgccgctacgcctacgtgctgctcgaatcccccgtg
cgcccaagcgtggaacaaggccaagtgggctgggtgttccgcccgctcgacgccgacgcc
atgcgccaggccgccaagcatctcctcggcgagcacgacttcacttccttccgcgcgtcg
caatgccaggcgcacacgccggtgaagacgctgcgacgcatcgagatcgcgcgtcgcggc
gcctattggcgcttcgagttcgaagccaacgccttcctgcaccacatgatccgcaacatc
atgggctgcctcatcgccatcggcagcggccaccagccgccggggtggatggccgaggtg
ctggccgcgcgcagccgcgatgccgcggcccccaccttctcccccgatggactgtacttt
ctcggcccggtctacgatgccgcctggggcctgccggaacgcacgcccgctttcgactgg
ctcccatga
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