Hydrogenophaga sp. PBC: Q5W_16690
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Entry
Q5W_16690 CDS
T04491
Name
(GenBank) Fe3+/spermidine/putrescine ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
hyb
Hydrogenophaga sp. PBC
Pathway
hyb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hyb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q5W_16690
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hyb02000
]
Q5W_16690
Transporters [BR:
hyb02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Q5W_16690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
AAA_16
AAA_22
Rad17
ABC_ATPase
RsgA_GTPase
AAA
AAA_28
AAA_19
AAA_29
AAA_5
nSTAND3
AAA_18
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
AOS80489
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All DBs
Position
3520006..3521013
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AA seq
335 aa
AA seq
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MHAEAPPPAAVELIALTKRYGPSSVAVDSIDLRIAPNSYCCLLGPSGCGKSTTLRMIAGH
ESTTSGDILLENRNITTLPAASRGTAMMFQSFALFPHLTALDNVAFSLKMKGEDKAGRQA
KAQALLERVAMGHLAQRKPGELSGGQQQRVALARALITQPRVLLLDEPLSALDPFLRIQM
RAELRQWQKDLGLSFIHVTHSQEEAMALADTMVVMNQGLIEQVGSPHEVYNRPATEFVAR
FMGGHNVLSTADGKVAVRNDHITLDEADAGSDWQATVSDVEYQGTYVLLGLRIDGGSGET
VSVMVPEARFLQRPFQLGERARLTWDPQRAHRFAA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcacgccgaagcccccccccccgccgccgtcgagctgatcgcgctgaccaaacgctac
ggcccgtcgagcgtggccgtcgacagcatcgatctgcgcatcgcccccaacagctactgc
tgcctgctgggcccttcgggctgcggcaaaagcaccacgctgcgcatgatcgcggggcac
gaaagcaccaccagcggcgacatcctgctggagaaccgcaacatcaccacgctgccggcg
gccagccgcggcacggccatgatgttccagagcttcgccctgtttccgcacctgacggcg
ctggacaacgtggccttcagcctgaagatgaagggcgaggacaaggccggtcgccaggcc
aaggcgcaggccctgctggagcgcgtggccatgggccacctggcgcagcgcaagccgggc
gagctgtccggtggccagcagcagcgcgtggccctggcgcgcgcgctcatcacccagccg
cgcgtgctgctgctggacgaacccctgtccgccctggacccgttcctgcgcatccagatg
cgcgccgaactgcgccagtggcagaaggacctgggcctgagcttcatccacgtgacgcac
tcgcaagaagaggccatggccctggccgacaccatggtggtgatgaaccagggcctgatc
gagcaggtcggcagcccgcacgaggtctacaaccgccccgccaccgaattcgtggcccgc
ttcatgggcggacacaacgtgctgtccaccgccgacggcaaggtggccgtgcgcaacgac
cacatcacgctcgacgaggccgacgccgggagcgactggcaagccaccgtgagcgacgtg
gagtaccagggcacctacgtgctgctgggcctgcggatcgacggcggaagtggcgagacc
gtctcggtcatggtgcccgaggcccgcttcctgcaacgccccttccagttgggcgagcgc
gcgcgcctgacttgggacccgcagcgcgcccatcgcttcgccgcctga
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