Hydrogenophaga sp. PBC: Q5W_18560
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Entry
Q5W_18560 CDS
T04491
Name
(GenBank) intradiol ring-cleavage dioxygenase
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
hyb
Hydrogenophaga sp. PBC
Pathway
hyb00362
Benzoate degradation
hyb00624
Polycyclic aromatic hydrocarbon degradation
hyb01100
Metabolic pathways
hyb01120
Microbial metabolism in diverse environments
hyb01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
hyb00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Q5W_18560
00624 Polycyclic aromatic hydrocarbon degradation
Q5W_18560
Enzymes [BR:
hyb01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
Q5W_18560
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Motif
Pfam:
Dioxygenase_C
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
AOS82279
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Position
complement(3896725..3897282)
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AA seq
185 aa
AA seq
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MSPAVAQKPGLLPTPRQTEGPFYPVALPADTDADLLRNGQVNYGKGQAAWVEGTVVDLDG
RALQGAVVEIWQCDEAGHYHHPGDGNRADPAFQGFGRVAVDREGRYRFRTIRPVPYSGRT
PHIHVKVKLDRMELLTTQLYVQGDPGNERDGLWRRLDEAGRMALTRPFAPDGDGVKATFP
IVIQA
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
ctgagcccggccgtggcgcagaagcccggcctgctgcccaccccccgccagaccgagggc
cccttctaccccgtggcgctgcccgccgacaccgacgccgacctgctgcgcaacggccag
gtgaattacggcaagggccaggccgcctgggtcgagggcacggtggtcgatctcgacggg
cgcgcgctgcaaggcgcggtggtcgagatctggcagtgcgacgaagccggccactaccac
cacccgggcgacggcaaccgcgccgacccggccttccagggcttcggccgcgtggcggtg
gaccgcgagggccgctaccgtttccgcaccatccgccccgtgccctacagcggccgcacg
ccgcacatccacgtgaaggtgaagctggaccggatggagctgctcaccacccagctctac
gtgcaaggtgacccgggcaacgagcgcgacggcctctggcgccggctcgacgaggccggc
cgcatggcgctgacgcggccgttcgcacccgatggcgatggcgtgaaggccacattcccc
atcgtcatacaggcctga
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