Hydrogenophaga sp. PBC: Q5W_20590
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Entry
Q5W_20590 CDS
T04491
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit alpha
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
hyb
Hydrogenophaga sp. PBC
Pathway
hyb00362
Benzoate degradation
hyb00624
Polycyclic aromatic hydrocarbon degradation
hyb01100
Metabolic pathways
hyb01120
Microbial metabolism in diverse environments
hyb01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
hyb00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Q5W_20590
00624 Polycyclic aromatic hydrocarbon degradation
Q5W_20590
Enzymes [BR:
hyb01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
Q5W_20590
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Motif
Pfam:
Dioxygenase_C
CarboxypepD_reg
SpaA
Big_1
Motif
Other DBs
NCBI-ProteinID:
AOS81184
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Position
4336164..4336676
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AA seq
170 aa
AA seq
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MGGPRAKGNAIEIVGTIKDQSGKPVAGALIEVWAANVHGKYEHPADNSSQPIDPNFKGYG
RAITGPSGIYRFVGIKPGAYPNPGYDDWMRPPHVHFSVYAAGVMHRLVTQMYFPGEALND
IDPILNGIDDLDARASLIAVDQGLFPDIGRRYRFDIALQGDAETQFFIER
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
gtgggggggcctcgtgccaagggcaacgccatcgagattgttgggaccattaaggatcag
tctggcaagccggtcgctggcgccttgatcgaggtgtgggctgccaatgtccatggcaag
tatgagcacccggccgacaactctagccagccgatcgatcccaacttcaagggttatggc
cgtgccattactggtccatccggaatatatcggttcgtcggcatcaagcctggggcttat
cctaaccctggctacgatgactggatgcgccctccccatgtgcatttctccgtctatgcg
gccggagtgatgcaccgcttggtgacgcagatgtactttccgggggaggctctgaacgat
attgatccgattctcaatggaatcgatgacctagacgcaagggcaagcctgattgccgtc
gatcagggactgtttccggatatcgggaggcgatatcgcttcgatatcgccctccaaggc
gatgcggagacgcagttcttcatcgagcgttga
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