Hydrogenophaga sp. PBC: Q5W_21380
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Entry
Q5W_21380 CDS
T04491
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
hyb
Hydrogenophaga sp. PBC
Brite
KEGG Orthology (KO) [BR:
hyb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyb03400
]
Q5W_21380
DNA repair and recombination proteins [BR:
hyb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Q5W_21380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DUF7125
AAA_16
AAA_22
RecA_N
ChlI
GvpD_P-loop
DnaB_C
Lon_C
NTPase_1
Zn_Ribbon_YjdM
AAA_30
nSTAND3
NPHP3_N
SLFN-g3_helicase
nSTAND_NTPase5
AAA_5
NB-ARC
AAA_14
AAA_29
ATPase_2
MCM
Motif
Other DBs
NCBI-ProteinID:
AOS82323
LinkDB
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Position
4501094..4502473
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AA seq
459 aa
AA seq
DB search
MAKDKTIYTCSECGGTSPRWLGKCPHCNAWNTLVEGVAEGGGAPAKNRFAALAKTSEVMP
LSRIEAREVERTPTGHEELDRVLGGGIVEGGVVLIGGDPGIGKSTLLLQALDSLQRAGFP
SLYVTGEESGAQVALRARRLGLEGSEVQVLAEIQLEKILATLDAEKPAIAVIDSIQTVYS
EQLTSAPGSVAQVRECAAHLTRAAKASGTAIVLVGHVTKEGALAGPRVLEHMVDTVLYFE
GDTHSSFRLIRAIKNRFGAVNEIGVFAMTEKGLKGVSNPSAIFLSQHAQPVPGSCVMVTL
EGTRPLLVELQALVDSGGPSPRRLSVGLERDRLAMLLAVLHRHAGVACLDQDVFVNAVGG
VRISEPAADLGVMLAITSSLRGKPLPKGFLAFGEVGLAGEVRPAPRGQERLKEAAKLGFS
VAVVPRANLPKKNDKAFDGLTVHGVERIEEALELVRRID
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggacaagacgatctacacctgcagcgagtgcggcggcaccagcccgcgctgg
ctgggcaagtgcccgcactgcaacgcctggaacacgctggtggaaggcgtggcagagggc
ggcggcgcgccagcgaagaaccgcttcgcggcgctggccaagaccagcgaggtgatgccg
ctctcgcgcatcgaggcgcgcgaggtggaacgcacgcccaccggtcacgaggagctggac
cgcgtgctgggcggcggcatcgtcgagggcggcgtggtgctgatcggcggcgacccgggc
atcggcaagtccaccctgctgctgcaggcgctggacagcctgcagcgcgcggggtttccg
tcgctttacgtgacgggtgaagaaagcggcgcccaggtggcgctgcgcgcgcgccgattg
ggcctggagggctccgaggtgcaggtgctggccgagatccagctcgagaagatcctggcc
acgctggacgccgagaagcccgccatcgcggtgatcgactcgatccagaccgtctattcg
gaacagctcaccagcgccccgggttcggtggcgcaggtgcgcgaatgcgcggcccacctc
acgcgcgcggccaaggcctcgggcacggccatcgtgctggtgggtcacgtcaccaaggaa
ggcgcgctggccggcccgcgcgtgctggagcacatggtggacaccgtgctctatttcgag
ggcgacacgcacagcagcttccggctcatccgcgcgatcaagaaccgcttcggcgcggtc
aacgagatcggcgtgttcgccatgaccgagaagggcctgaagggcgtgagcaaccccagc
gccatcttcctgtcgcagcacgcccagccggtgccgggcagttgcgtgatggtgacgctg
gagggcacgcgccccttgctggtggaactgcaggccctggtggacagcggcgggcccagc
ccgcgccgcctgagcgtgggcctggagcgcgaccgcctggccatgctgctggccgtgctg
caccgccacgcgggcgtggcctgcctggaccaggacgtcttcgtcaatgccgtgggcggc
gtgcgcatcagcgagcccgcggccgacctgggcgtgatgctggccatcaccagcagcttg
cgcggcaagccgctgcccaagggctttctggccttcggcgaggtgggcctggccggcgag
gtgcggcccgcgccgcgcggccaggagcgcctgaaagaggcagccaaactgggcttttcc
gtggcggtggtgcccagggccaacctgccgaagaagaacgacaaggccttcgacggcctg
accgtgcacggggtcgagcgcatcgaagaggcgctggagctggtgcgacgcatcgactga
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