Hydrogenophaga sp. PBC: Q5W_21640
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Entry
Q5W_21640 CDS
T04491
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
hyb
Hydrogenophaga sp. PBC
Pathway
hyb00550
Peptidoglycan biosynthesis
hyb01100
Metabolic pathways
hyb01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
hyb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Q5W_21640
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Q5W_21640
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hyb01011
]
Q5W_21640
Enzymes [BR:
hyb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Q5W_21640
Peptidoglycan biosynthesis and degradation proteins [BR:
hyb01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Q5W_21640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
AOS81367
LinkDB
All DBs
Position
4553482..4555449
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AA seq
655 aa
AA seq
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MTELRNVDADIWQFRKRVIVMALAVLFAFGLIVSRMVWLQVHKHEEYMAQAESNRTAVLP
VVPNRGQIVDRDGRVLASNYSAYTLELTPSLIEDLDDTISGLRELVDIGPRDERRFRKLL
EESHRFDSLPIRTRLSDEEVARFTAQRFRFPGVEVRARLLRHYPNGETASHVIGYIGRIN
QREKELIADWPEEEQANYRGTEYIGKLGAEQQHEQLLHGATGFERVETSAGGRAVRSLAA
TPPTPGDTVVLTIDVKLQHLVEALYGDRRGALVAIDPRNGEVLAFVSKPTFDPNLFVEGI
DVENWRALNESLDKPLLNRALRGTYPPGSTYKPFMAMAALETGARKAETVINDPGYWMLG
NHRFRSHGDGGLGAVDLRRSIIKSSNVYYYSLANEMGVDAIHDFMKPLGIGQITGIDLKG
EVRGVLPSQEWKRNTYKRPDQQRWYAGETISLGIGQGYNNFTMLQMANAMATLANGGVKH
APHLSLARRNPLTGQVDPLPAPPTENLNFKPEHVRAVLSAMQAVTTEGTSARVFSGAGYT
SGGKTGTAQAVTIGQRERYDARKLEEHQRDHSLYLAFAPADAPRVALAVIVENAGFGAAA
AAPIARRVFDYLLLGQYPSEQDIASVQSGGGGPPQGTPRQVSEVPWPPAPLVAPQ
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgactgagttgcgaaacgtcgacgcggacatctggcagtttcgcaagcgcgtcatcgtg
atggcgctggcggtgctgttcgccttcgggctcatcgtctcacgcatggtctggctgcag
gtgcacaagcacgaggagtacatggcccaggccgagagcaaccgcacggcggtgctgccg
gtggtgcccaaccgcggccagatcgtcgaccgcgacggccgcgtgctggccagcaactac
tcggcctacacactggaactcacgccctcgctgatcgaggacctggacgacaccatcagc
ggcctgcgcgagctggtcgacatcggcccacgcgacgaacgccgctttcgcaaactgctc
gaggagtcgcaccgcttcgactcgctgcccatccgcacccgcctgagcgacgaggaggtg
gcccgcttcaccgctcagcgcttccgctttcccggcgtcgaggtgcgcgcgcgcctgctg
cgccactaccccaacggcgaaacggccagccacgtgatcggctacatcggccgcatcaat
cagcgcgaaaaggagctcatcgccgactggcccgaggaagagcaggccaattaccgcggc
accgagtacatcggcaagctgggggccgagcagcagcatgagcagttgctgcacggcgcc
accggcttcgagcgcgtggaaacctcggccggcggacgcgcggtgcgctcgctcgcggcc
acgccgcccacgccgggcgacaccgtcgtgctcaccatcgacgtcaagctgcagcacctg
gtggaggcgctgtatggcgatcggcgcggcgcgctggtggccatcgacccgcgcaacggc
gaggtgctggccttcgtctccaagcccaccttcgaccccaacctcttcgtcgagggcatt
gacgtggagaactggcgcgccctcaacgagtcgctcgacaagccgctgctcaaccgcgcc
ctgcgcggcacctacccaccgggatccacctacaagcccttcatggccatggccgcgctg
gaaaccggcgcgcgcaaggccgaaacggtcatcaacgaccccggctactggatgctgggc
aaccaccgcttccgcagccacggcgacggcgggctgggcgcggtggacctgcgccgcagc
atcatcaagtcgagcaacgtctactactactcgctggccaacgagatgggcgtggacgcc
attcacgacttcatgaagcccctgggcatcggccagatcaccggcatcgacctcaagggc
gaggtgcgtggcgtgctgcccagccaggagtggaagcgcaacacctacaagcggcccgac
cagcagcgctggtacgccggcgaaaccatctcgctgggcatcggccagggctacaacaac
ttcaccatgctgcagatggccaacgccatggccacgctggccaatggcggcgtcaagcac
gcgccgcacctgtcgctggcgcggcgcaacccgctcacggggcaggtcgaccccctgccc
gcgccccccaccgagaacctgaacttcaagcccgagcacgtgcgcgccgtgctcagcgcc
atgcaggccgtcaccaccgagggcacctcggcgcgcgtgttctcgggcgccggctacacc
agcggcggcaagacgggcacggcgcaggccgtcaccatcggccagcgcgagcgctacgac
gcccgcaagctggaagagcaccagcgcgaccactcgctctacctggccttcgccccggcc
gacgcgccgcgcgtggccctggcggtgatcgtggaaaacgccggttttggcgccgccgcg
gccgcccccatcgcgcgccgggtgttcgactacctcctgctgggccagtaccccagtgag
caggacatcgcgtccgtgcagtcgggcggcggcggcccgccgcagggcacgccgcgccag
gtcagcgaagtgccgtggccacccgcgcccctggtggcaccgcagtaa
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