Hydrogenophaga sp. PBC: Q5W_24170
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Entry
Q5W_24170 CDS
T04491
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
hyb
Hydrogenophaga sp. PBC
Pathway
hyb00061
Fatty acid biosynthesis
hyb00071
Fatty acid degradation
hyb01100
Metabolic pathways
hyb01212
Fatty acid metabolism
hyb02024
Quorum sensing
hyb04146
Peroxisome
Module
hyb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hyb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Q5W_24170
00071 Fatty acid degradation
Q5W_24170
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Q5W_24170
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q5W_24170
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hyb01004
]
Q5W_24170
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hyb04147
]
Q5W_24170
Enzymes [BR:
hyb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Q5W_24170
Lipid biosynthesis proteins [BR:
hyb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Q5W_24170
Exosome [BR:
hyb04147
]
Exosomal proteins
Exosomal proteins of breast milk
Q5W_24170
Exosomal proteins of breast cancer cells
Q5W_24170
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AOS81819
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Position
5077579..5079264
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AA seq
561 aa
AA seq
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MPTATADRPWLAAYPEGVPADIDVNQYPSLVHLMEESFHRFGDRTAYSFMGKDVSFAQTD
ALSQAFAAYLQGLGLVKGDRVAIMMPNVPQYPAVVAGILRAGLVVVNVNPLYTARELEHQ
LKDSGSKAIVIIENFAHTLEQCIAATPVKHVVLAAMGDLLGFLKGGLVNYVVRKVKKMVP
PFNLPQAVRFNDAIARGSRGSFKKPEIRADDMAVLQYTGGTTGVSKGAVLLHRNIVANVL
QSEAWNDPVMQKVPAGEQPPCVCALPLYHIFAFTVNMMLSLRVGGKTILIPNPRDLPAVL
KELSKHRFHSFPAVNTLFNGLANHPDFNTVDWSHLKVSVGGGMAVQGAVAKRWLEKTGCP
ICEGYGLSETSPSATCNPTTSTEYTGTIGVPLPNTRLKCLDDDGNEVPLGQPGEIAIHGP
QVMAGYWQRPDETAKVMTPDGYFKSGDIGIMDARGYFKIVDRKKDMVLVSGFNVYPNEVE
DVVAQLAGVLECAVVGVPDEKTGEAVKLVIVKKDPALTEEQVREYCRANLTGYKQPRVIE
FRTELPKTPVGKILRRELRDK
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccgccaccgccgaccgcccctggctcgccgcctatcccgagggggtgcccgcc
gacatcgacgtgaaccagtacccctcgctggtgcacctgatggaggagagcttccaccgc
ttcggcgatcgcaccgcctacagcttcatgggcaaggacgtgagcttcgcgcagaccgac
gcgctgtcgcaggccttcgcggcttacctgcaaggcctgggcctggtgaagggcgaccgc
gtggcgatcatgatgcccaacgtgccgcaatacccggcggtggttgcaggcatcctgcgc
gcggggctggtggtggtcaacgtcaacccgctctacaccgcgcgcgagctggagcatcag
ctcaaggactcggggtccaaggccatcgtcatcatcgagaacttcgcgcacacgctggag
cagtgcatcgcagccacgccggtcaagcacgtggtgctcgccgccatgggggacctgctc
ggcttcctcaagggtggcctcgtcaactacgtggtgcgcaaggtcaagaagatggtcccg
cccttcaacctgccgcaggcggtgcgcttcaatgacgccatcgcgcgcggctcgcgtggc
tcgttcaagaagcccgagatccgcgccgacgacatggcagtgctgcagtacaccggcggc
accactggcgtcagcaagggggccgtgctcctgcaccgcaacatcgtcgccaacgtgctg
cagtccgaggcctggaacgacccggtgatgcaaaaagtgccggccggcgagcagcccccc
tgcgtgtgcgcgctgccgctgtaccacatcttcgcgttcaccgtgaacatgatgctgagc
ctgcgcgtgggcggcaagaccatcctcatccccaacccgcgcgacttgcccgcggtcctg
aaggaactgagcaagcaccgcttccacagcttccccgcggtgaatacgctgttcaatggc
ctggccaaccaccccgacttcaacaccgtggactggagccacctgaaggtctccgtgggc
ggtggcatggccgtgcaaggcgcggtggccaagcgctggctcgaaaaaaccggttgcccg
atctgcgagggctacggcctgtccgagaccagtccctcggccacgtgcaaccccaccacc
agtaccgagtacaccggcaccatcggcgtgccgctgccgaacacacgcctgaagtgcctg
gacgacgacggcaacgaggtgcccctgggccagcccggcgagatcgccatccacggcccg
caggtgatggcgggctactggcagcgccccgatgagaccgccaaggtcatgacgcccgac
ggctacttcaagagcggcgacatcggcatcatggacgcgcgcggctacttcaagatcgtg
gaccgcaagaaggacatggtgctggtcagcggtttcaacgtctacccgaacgaggtggag
gacgtggtggcgcaactggccggcgtgctggagtgcgcggtggtgggcgtgcccgacgag
aagaccggcgaggccgtgaagctcgtgatcgtgaagaaggacccggcgctcaccgaggag
caggtgcgcgagtactgccgcgccaacctcacgggttacaagcagccgcgcgtgatcgag
ttccgcaccgaactgcccaagacgcccgtgggcaagatcctgcgccgcgagctgcgcgac
aagtga
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