Hydrogenophaga sp. PAMC20947: E5678_00340
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Entry
E5678_00340 CDS
T05960
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
hyc
Hydrogenophaga sp. PAMC20947
Pathway
hyc00730
Thiamine metabolism
hyc01100
Metabolic pathways
hyc01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
E5678_00340 (thiC)
Enzymes [BR:
hyc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
E5678_00340 (thiC)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QCB44624
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Position
complement(69915..71825)
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AA seq
636 aa
AA seq
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MNAPDKIPFADQFALSREPFPASRKVHVAGKLPGVNVPMREIELTNGERVTVYDTSGPYS
DPTASIDIRRGLPDLRGPWLDARGDTETYEGRQRAALDDGVKNEAEQNNTTIERIQALRA
EAAGLQRTPRRARSGQNVTQLHYARKGIVTPEMEFVALRENGKREWMQEYLNDPAREQRL
RGNPMGARIPEVFTPEFVRDEIARGRAIIPANINHPEVEPMAIGRNFGVKINANIGNSAV
TSSIEEEVDKLVWATRWGADNVMDLSTGRNIHTTRDWIVRNSPVPIGTVPIYQALEKVGG
VAEDLTWAIYRDTLIEQAEQGVDYFTIHAGVRLAYIHLTAQRRTGIVSRGGSILAKWCIT
HHQENFLYTQFDEICEIMKAYDVSFSLGDGLRPGCASDANDEAQFAELKTLGELTQKAWK
HDVQTMIEGPGHVPMHLIQANMDEQLKHCDEAPFYTLGPLTIDIAPGYDHIASAIGAAMI
GWMGTSMLCYVTPKEHLGLPDRDDVKQGIMAYKIAAHAADIAKGHPGARARDDAMSKARF
EFRWIDQFNLGLDPDTARDYHDETLPKDSSKEAHFCSMCGPKFCSMKITQDVRDYAAAKG
VSDAQALTEGMAQKSAEFKAVGGEFYVPVDSIKSRA
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcccccgacaaaattcctttcgcagaccagttcgcactcagccgcgagccgttc
cctgcatcgcgcaaggtccatgtggccggcaagctgcccggtgtcaacgtgcccatgcgc
gaaatcgaattgaccaacggcgaacgcgtcacggtgtacgacacctccggcccctacagc
gacccgaccgccagcatcgacatccggcgcggtctgcccgatctgcgcggcccctggctc
gacgcacgcggagacaccgagacctatgagggccgccagcgcgcagccctggacgatggc
gtgaagaacgaagccgagcagaacaacaccaccatcgaacgcatccaggcgctgcgcgcg
gaggcagcgggtctgcaacgcacgccacggcgcgccagatcgggtcagaacgtgacccag
ctgcactacgcgcgcaaaggcatcgtgacgcccgaaatggaattcgtggcgctgcgcgaa
aacggcaagcgcgagtggatgcaggaatacctgaacgatccggcgcgcgaacagcgcctg
cgtggcaatcccatgggtgcccgcatccccgaggtgttcacccccgagttcgtgcgcgac
gagatcgcccgcgggcgcgccatcatcccggccaacatcaaccaccccgaggtcgagccc
atggccatcggacgcaacttcggcgtcaagatcaacgccaacatcggcaactcggccgtg
acctccagcatcgaagaagaagtggacaagctggtgtgggccacgcgctggggcgcggac
aacgtgatggacctgtccaccggcaggaacatacacaccacacgcgactggatcgtgcgc
aattcgccggtgcccatcggcactgtgccgatctaccaggcgctggagaaagtgggcggc
gtggccgaagacctcacctgggcgatctaccgcgacacgttgattgaacaggccgaacaa
ggcgtggactacttcaccatccacgccggcgtgcgcctggcctacatccacctcaccgcg
caacgccgcaccggcatcgtctcgcgcggtggcagtatcctggccaagtggtgcatcacc
caccaccaggaaaacttcctctacacgcagttcgacgagatctgcgagatcatgaaggcc
tacgacgtgagcttctcgctgggcgacggcctgcgcccgggttgcgcatcagacgcgaac
gacgaagcccagttcgccgaactcaaaaccctgggcgaactgacgcaaaaggcctggaag
cacgacgtgcagaccatgatcgaaggtccgggccatgtgcccatgcacctgatccaggcc
aacatggacgagcagctcaagcactgcgacgaagcgccgttctacacactgggcccattg
accatcgacattgcgccgggctacgaccacatcgcgtcggccatcggcgcggccatgatc
ggctggatgggcacttcgatgctctgttacgtcacgcccaaggaacacctggggctgcca
gaccgcgacgacgtgaagcagggcatcatggcctacaaaatcgccgcgcacgcagccgac
attgccaagggccaccctggtgcccgggcccgcgacgacgccatgagcaaagcgcgcttc
gagttccgctggatcgaccagttcaacctcggtctggacccggacacggcccgcgattac
cacgacgaaaccctgcccaaagattcatcgaaagaagcgcacttttgctccatgtgcggg
ccgaaattttgctcgatgaagatcacacaggatgtgcgcgactacgccgccgccaaaggc
gtgagcgacgcccaggcattgaccgagggcatggcgcagaagagcgcggaattcaaggcg
gtgggcggtgagttctacgtgcccgtggactccatcaaatccagggcctga
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