Hydrogenophaga sp. PAMC20947: E5678_00380
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Entry
E5678_00380 CDS
T05960
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hyc
Hydrogenophaga sp. PAMC20947
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyc03400
]
E5678_00380
Enzymes [BR:
hyc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
E5678_00380
DNA repair and recombination proteins [BR:
hyc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
E5678_00380
Prokaryotic type
E5678_00380
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
QCB44631
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Position
complement(81786..83039)
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AA seq
417 aa
AA seq
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MDMNDTLHVPPTRAAVLARIEAVRPAEYARTRNAIEGAVTQLSPYITHGLITLPEVLAGV
ATRHRLSVSHKFVFELGWREYFRHVWRQRGGDIFHSLHAGPLPESAYAAVLPADIREART
GVPAIDQAVRTLYTAGTLHNHARMWLASFVVHVRKVHWRAGADWLYAHLLDGDLASNHLS
WQWVAGTGSHKPYVFNAENVAKYAPVAWHSPGSAIDQSYEAMQALASRPGTNAVWERPGG
MGTTEPPLTAAPDARFARAPDPALVAGRDVWLVHPWALGEPPDDLPADCLRLGWWPLDFH
AEWPWSEARWAFVGQRMAHLTASRWACASSQLADALAGAQSVHTPFDPHVDALLPRCVTQ
RPATPLFAPVEQPCGSFSQWWARTARPVTHLHQLPGLAHLAQEGSAGPLFTEQAPTP
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggacatgaacgacaccttgcacgtccccccaacccgtgcggccgtgctcgcgcgcatc
gaagcggtgcgcccggccgaatacgcccgcacccgcaatgcgatcgaaggcgcggtcacg
cagctctcgccctacatcacccacggcctgatcaccctgcccgaggtgctggcgggtgtg
gcgactcgtcaccgtttgtccgtgagtcacaagttcgtgttcgaactcggctggcgcgag
tacttccgccacgtctggcgccaacggggcggcgatatcttccattcgctgcacgccggc
ccgctgcccgagagcgcctacgcggcggtgctgcccgccgacatccgcgaggcccggacc
ggtgtgcccgccatcgaccaggccgtgcgcacgctctacaccgcagggaccctgcacaac
catgcccgcatgtggctggccagctttgtggtgcacgtgcgcaaagtgcattggcgcgca
ggtgccgactggttgtacgcccacctgctcgatggcgacctcgccagcaaccacctcagc
tggcaatgggtggcgggcacaggcagccacaagccctatgtgttcaacgctgaaaacgtc
gcgaaatacgcgcccgtggcctggcacagcccgggcagtgccattgaccagtcctacgaa
gcgatgcaggctctggcctcacgtccaggaaccaacgcagtatgggaacggcccgggggc
atgggcaccaccgagccccccttgacggcggcacccgatgcccgctttgcacgcgcgccc
gacccagccttggtcgccggccgcgatgtctggttggtgcatccctgggccctgggcgaa
ccgcccgacgatttgcccgccgactgcttgcggctcggctggtggccgctggactttcac
gccgaatggccctggagcgaggctcgctgggcttttgtggggcagcgcatggcccacctc
actgcaagccgctgggcatgtgcttcaagccagctcgccgatgcgctcgctggcgcgcaa
tcggtacacacgccattcgatccccatgtcgacgccctgctgccccgctgtgtgacccaa
cggccagccactcccctgtttgcacctgttgagcagccttgcggctcgttttcacaatgg
tgggcccgcaccgcccgcccggtcacgcacctgcaccagctgcccggtctggcgcacctg
gctcaagaagggtccgcgggcccgctgttcaccgagcaagcaccgactccttga
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