KEGG   Hydrogenophaga sp. PAMC20947: E5678_01505
Entry
E5678_01505       CDS       T05960                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
hyc  Hydrogenophaga sp. PAMC20947
Pathway
hyc02020  Two-component system
Brite
KEGG Orthology (KO) [BR:hyc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    E5678_01505
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:hyc02022]
    E5678_01505
Two-component system [BR:hyc02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   E5678_01505
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 HTH_8 AAA_5 AAA bpMoxR TIP49 HTH_30 RNase_J_b_CASP FleQ AAA_16 MdcG_N
Other DBs
NCBI-ProteinID: QCB44831
LinkDB
Position
complement(330516..331844)
AA seq 442 aa
MNPMNVLLIEDDPLVMLGAQQALQLADIAVIQATNVEAALQQVARACPSVVLSDVRLPDE
DGFEVLRRMQTLDAEVPVILMTGHGDIRMAVEAMRLGAYDFLEKPFSSERLVEVIRRALE
KRRLVQDNRRLKALVAPQQDFGLVGQTPGMVEARRRIAALATTQVDLLIRGETGTGKEVV
ARAVHDASGRGGPFVAINCGALPEAIFESEMFGHEIGAFTGATRKRIGKLEYAHGGTVFL
DEIESLPMAQQVKLLRVLQERSFERLGGNQTTRIDCRFIAAAKDDLKALAHAGSFRADLF
YRLHVACIELPALRERRDDIPHLLAHCLHLSAERYGTESPSWSNRQMAQWMAHDWPGNVR
ELKNLADRLCLGLESDQLAPSGATGMAPSLAQQVDDFEKQLLTHTLAACHGQVSQASDQL
KIPRKTLYDKLARHDIDPARFR
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgaaccccatgaacgtcctgttgattgaagacgaccctctcgtcatgctcggggcgcaa
caagccttgcaactggcggacatcgccgtcatacaggccaccaacgtcgaggcggccctg
caacaagttgcacgggcctgtccatccgttgtgctgagcgatgtgcgcctgcccgacgaa
gacggctttgaggtgctcaggcgcatgcagacgctggacgccgaggtcccggtgattctc
atgacgggccacggtgacatccgcatggctgtggaagccatgcgcctgggcgcctacgat
ttcctggagaagccgttttcctcggagcgcctggtcgaggtcattcgccgggctctggaa
aaacgccgcctggttcaagacaaccgacgcttgaaggcgctggtggcccctcaacaagat
tttgggctggtgggccagacaccgggcatggtggaagcgcgccgccgcatagcggcactg
gccaccacccaggtggatctgctgatccggggtgagaccggcaccggcaaagaagtggtc
gcccgtgccgtgcacgatgcctctggacgcggggggccctttgttgccatcaactgcggc
gctttgcccgaggccattttcgagagcgagatgtttggtcacgagatcggtgccttcacg
ggcgctacgcgcaagcgcatcggcaagctggaatacgcccacggcggtaccgtgtttctg
gatgagattgaaagcttgcccatggcccagcaggtcaagctgctgcgcgtgctccaggaa
agatcgttcgagcggctgggcggcaatcaaaccacgcgcatcgactgccgctttattgcg
gcggccaaggacgatctcaaggcgctcgcccatgccggctcatttcgcgccgaccttttc
taccgcttgcacgtggcctgcatcgaactgccggccttgcgcgagcggcgcgacgatatc
ccccacttgctggcgcattgtctgcacctctctgctgagcgctacggcaccgagtcgccc
agctggtcaaaccggcaaatggcccaatggatggcgcacgattggccgggcaatgtgcgt
gagttgaagaacctggccgaccgcctctgcctgggactcgaatcggatcaactggcccca
agcggcgccaccggcatggccccctcactcgcacaacaggtcgatgattttgagaagcag
ctgctcacacacacgctggcagcttgccacgggcaggtaagccaagcctcggaccagttg
aaaataccccgcaagacgctctacgacaagctggcgcgccacgacatcgatccggcgcgc
tttcgctaa

DBGET integrated database retrieval system