Hydrogenophaga sp. PAMC20947: E5678_01520
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Entry
E5678_01520 CDS
T05960
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
hyc
Hydrogenophaga sp. PAMC20947
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hyc03036
]
E5678_01520 (xerD)
Chromosome and associated proteins [BR:
hyc03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
E5678_01520 (xerD)
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Paralog
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
DUF3435
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
QCB44834
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All DBs
Position
334830..335783
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AA seq
317 aa
AA seq
DB search
MPASSSSDRSAVANPVLFSASQAQAEAFTDALWLEEGLSRNTLDAYRRDLVLLGDWLAGQ
GLRLSEARESDLNGYFAARHAQTRATTANRRLTVFKRYFRWALRERQIEVDPTLRLSAAR
QPMRVPKSLSEAQVEALLAAPDTTTPLGQRDRAMLELMYASGLRVSELVTLKTFHVGHNE
HVLRVMGKGNKERLVPFGEVAGQWLRLWLTEGRPDVLAGRQSEDLFVTARGSRAGEAMSR
VMFWSLVKKYAAQAGITAPLSPHTLRHAFATHLLNHGADLRAVQMLLGHADISTTTIYTH
VARERLKSIVALHHPRG
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcctcttcatcctctgaccgctctgcggttgccaaccctgtgctcttcagcgcc
agccaggcgcaggcagaagccttcacagatgccctctggctggaagaggggctatcgagg
aacacgctggacgcgtaccggcgcgatctggtgttgttgggtgactggctggcgggccag
gggctccggctgtccgaggcgcgggagtccgatctgaacgggtactttgccgcgcgccat
gcgcaaacccgcgccaccacagcgaaccggcgcctcacggtgttcaaacgctattttcgc
tgggcgctgcgcgagcgccagatcgaggtggatcccaccttgcggctgtcggcggcgcgc
cagcctatgcgggtgcccaagagcttgagcgaggcgcaagttgaggctttgctggcggcg
ccagacacgacaacgccgctggggcagcgcgatcgcgcgatgttggagctgatgtacgcg
agcgggttgcgtgtgagcgaactggtgacgctgaaaacgtttcatgtcgggcacaacgag
catgtgttgcgcgtcatgggcaaaggcaacaaggagcggctggtgccttttggtgaggta
gccgggcaatggctgcggctctggctgaccgaggggcgccccgatgtgctggccgggcgg
caaagcgaagacctgtttgtcacggcccgtggctcccgggcgggcgaggccatgagccgt
gtgatgttctggagcctggtgaaaaaatacgccgcgcaggcgggcatcacggcgccgctg
tcgccacacacgttgcgccacgcctttgccacccatttgctcaaccatggggcggatctc
cgggctgtccagatgctgctggggcacgccgacatttccaccaccaccatctacacccat
gtggcgcgagagcgcttgaaaagcatcgttgcgttacaccacccccgtggctga
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