Hydrogenophaga sp. PAMC20947: E5678_01605
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Entry
E5678_01605 CDS
T05960
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
hyc
Hydrogenophaga sp. PAMC20947
Pathway
hyc00541
Biosynthesis of various nucleotide sugars
hyc01100
Metabolic pathways
hyc01250
Biosynthesis of nucleotide sugars
Module
hyc_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
E5678_01605
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hyc01005
]
E5678_01605
Enzymes [BR:
hyc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
E5678_01605
Lipopolysaccharide biosynthesis proteins [BR:
hyc01005
]
Lipid A
E5678_01605
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Gene cluster
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Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
QCB44850
UniProt:
A0A4P7R4F6
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Position
complement(350983..351840)
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AA seq
285 aa
AA seq
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MQLCGFPIGLDRPFFLIAGPCVIESEQLQMDVAGQLKEITASLGIPFIFKSSFDKANRSS
GTTFRGPGREKGLEILAKVKRELGIPVLTDVHTEDDIAAAAQVVDVLQTPAFLCRQTDFI
RAVAQSGKPVNIKKGQFLAPHDMKNVIDKARAAAKEAGLEEDNFMACERGASFGYNNLVS
DMRSLAIMRESNAPIVFDATHSVQLPGGQGTSSGGQREMVPVLARAAVAVGVAGLFMETH
PDPAKAMSDGPNAVPLKHMKALLETLLALDTVTKKNGFLENHFQA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcagctctgcggattccccatcggcctggaccggcccttcttcctgatcgcaggccca
tgcgtgatcgaatccgagcaactgcaaatggatgtggccggtcagctcaaagagatcacc
gcgagcctgggcatcccgttcatcttcaagagcagctttgacaaggccaaccgcagcagc
ggcaccaccttccgtggcccgggccgggaaaaggggctggaaatcctggccaaggtcaaa
cgcgagctggggattccggtgctcaccgacgtgcacaccgaagacgacattgccgccgcc
gcacaggtggtcgacgtcttgcagacccctgctttcctgtgccgccagaccgatttcatc
cgcgctgtggcccagtcgggcaagccggtgaacatcaaaaagggccagtttctcgccccg
cacgacatgaaaaacgtgatcgacaaagcgcgtgcagcggccaaagaagcgggcctggaa
gaagacaatttcatggcctgcgaacgcggcgccagctttggctacaacaacctggtgagc
gacatgcgctcgctggccatcatgcgcgagtccaacgcgcccatcgtgtttgatgcgacc
cacagtgtccagctgccaggcggtcaaggcacgagcagcggcgggcaacgcgagatggtg
ccggtgctggcgcgggctgcggtggccgtgggcgtggcgggtctgttcatggaaacccac
cccgatccagccaaggcaatgagcgatgggcccaatgcagtgccgctcaaacacatgaaa
gccttgctggaaaccttgctcgcgctcgacaccgtcaccaagaaaaacggtttcctggaa
aaccactttcaagcctga
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