Hydrogenophaga sp. PAMC20947: E5678_01780
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Entry
E5678_01780 CDS
T05960
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
hyc
Hydrogenophaga sp. PAMC20947
Pathway
hyc03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
E5678_01780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
hyc03011
]
E5678_01780
Ribosome [BR:
hyc03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
E5678_01780
Bacteria
E5678_01780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
Alpha-amylase_C_2
Motif
Other DBs
NCBI-ProteinID:
QCB44879
LinkDB
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Position
complement(384748..386430)
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AA seq
560 aa
AA seq
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MSESFAALFEESLKRSEMRSGEVITAEVVRIEHSHVVVNAGLKSEAYVPLAEFKNDQGEL
EVQVGDFVAVAIDSVENGFGDTLLSRDKAKRLASWMALEKALESGDFVTGTTGNKVKGGL
KVMVNGISAFLPGSLVDSRPTKDLTPYENKTLEFKVIKLDRKRNNVVLSRRAVVEASMGE
ERAKLMETLKEGAIVNGVVKNITEYGAFVDLGGIDGLLHITDMAWRRVRHPSEVVTAGQE
ITAKILKFDTEKHRVSLGLKQMGDDPWMGVARRYPQSTRMFGKITNIADYGAFVELEPGI
EGLVHVSEMDWTNKNVAPSKLVSLGDEVEVMVLDIDEDKRRISLGMKQCRANPWHEFAEQ
TKRGDRVKGPIKSITDFGVFVGLAAGIDGLVHLSDLSWNEPGEAAVRNFKKGQEVDAIVL
AIDVERERISLGIKQLDGDPFTTFVSINDKGSIVTGKVKTVDAKGAEIDLGEDVLGYLRA
SEISRDRVEDARNVLKEGDEVSTVVMNVDRKTRNIQLSIKAKDAVDQQEAMSTLSQQSSR
ENAGTTSLGALLRAKLDNNS
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatcttttgccgccctctttgaagaatccctgaagcgctccgaaatgcgctca
ggcgaagtcatcaccgctgaggtcgttcgtatcgaacacagccacgtggtggtcaacgca
ggtctgaagtcggaagcctatgtgcctctggctgaattcaagaacgaccaaggtgagctc
gaagtgcaagtcggtgacttcgtcgccgtggccatcgactccgtggaaaacggctttggc
gacacactgctgtcccgcgacaaggccaagcgcctggcttcgtggatggctctggaaaaa
gccctggagtccggcgacttcgtgaccggtaccaccggcaacaaagtcaagggcggcctc
aaggtcatggtcaacggcatcagtgccttcctgccaggctcactggtggacagccgtcca
accaaagacctcacgccttacgagaacaagaccctggaattcaaggtcatcaaactcgat
cgcaagcgcaacaacgtggtgctgagccgccgtgccgtggtggaagcctccatgggcgaa
gagcgcgccaagctgatggagaccctgaaagaaggcgccatcgtcaacggcgtggtcaag
aacatcaccgaatacggtgcgttcgtggacctgggtggcatcgacggcctgctgcacatc
accgacatggcatggcgccgcgttcgccacccatcggaagtggtcacggctggtcaggaa
atcaccgccaagattctcaagttcgataccgagaagcaccgcgtttctctgggcttgaag
cagatgggtgacgatccttggatgggtgtggcccgccgctacccacaaagcacgcgcatg
ttcggcaagatcaccaacatcgccgactacggcgcatttgttgaactcgagccaggcatc
gaaggcttggtgcacgtgtccgaaatggactggaccaacaagaacgttgcgccttccaag
ctggtgtcgctgggcgacgaagtcgaagtcatggttttggacatcgacgaagacaagcgc
cgcatctccctgggcatgaagcaatgccgcgccaacccttggcacgagtttgccgagcag
accaagcgcggtgaccgcgtcaagggcccgatcaagtcgatcaccgacttcggcgtgttc
gtgggtctggctgccggtatcgacggcctggtgcacctgtctgacctgtcttggaatgag
cccggcgaagccgctgtgcgcaatttcaagaagggccaggaagtggacgccatcgttttg
gcgatcgacgtcgagcgcgagcgcatctctctgggtatcaagcagctggatggcgacccg
ttcaccaccttcgtctcgatcaacgacaagggctccatcgtgaccggcaaggtcaagacc
gtggatgccaagggcgctgaaatcgacctgggcgaagacgtgttgggttacctgcgtgct
tccgaaatcagccgtgaccgcgtggaagatgcgcgcaacgtgctgaaagagggcgacgaa
gtgtcaaccgtggtgatgaacgtggatcgcaagacccgcaacatccagctgtcgatcaag
gccaaagatgctgtcgaccagcaagaagccatgtcgaccctgagccagcagtcttcccgc
gaaaacgccggcaccaccagcctgggcgctctgttgcgcgccaagctggacaacaacagc
tga
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