Hydrogenophaga sp. PAMC20947: E5678_02740
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Entry
E5678_02740 CDS
T05960
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hyc
Hydrogenophaga sp. PAMC20947
Pathway
hyc00260
Glycine, serine and threonine metabolism
hyc00460
Cyanoamino acid metabolism
hyc00630
Glyoxylate and dicarboxylate metabolism
hyc00670
One carbon pool by folate
hyc00680
Methane metabolism
hyc01100
Metabolic pathways
hyc01110
Biosynthesis of secondary metabolites
hyc01120
Microbial metabolism in diverse environments
hyc01200
Carbon metabolism
hyc01230
Biosynthesis of amino acids
hyc01240
Biosynthesis of cofactors
hyc04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
E5678_02740
09102 Energy metabolism
00680 Methane metabolism
E5678_02740
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
E5678_02740
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
E5678_02740
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
E5678_02740
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
E5678_02740
Enzymes [BR:
hyc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
E5678_02740
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Aminotran_5
Cys_Met_Meta_PP
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QCB45042
UniProt:
A0A4P7R7Y6
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All DBs
Position
complement(595600..596844)
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AA seq
414 aa
AA seq
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MYDRNILIEQTDPEIFAAIQAENARQEQHIELIASENYASPAVMAAQGTQLTNKYAEGYP
GRRYYGGCEHVDVAEQLAIDRVKQIFGADAANVQPHCGASANEAVFLAFLKPGDTIMGMS
LAEGGHLTHGMPLNMSGKWFNVVSYGLDANEAIDYDAMERKAHESKPKLIIAGASAYSLR
IDFERFAKVAKDVGAIFMVDMAHYAGLIAAGVYPNPVPHADVVTSTTHKSLRGPRGGIIL
MKAQFEKAINSAIFPGLQGGPLMHVIAAKAVAFKEALAPEFKVYQAQVLKNAQIVAETLT
ERGLRIVSGRTESHLMLVDLRSKGITGKEAEAVLGSAHMTINKNAIPNDPEKPMVTSGVR
IGTPAMTTRGFKDEEARATAHLIADVLDNPRDAANIETVRAKVNALTARFPVYK
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaccgcaacatcctcatcgagcaaaccgatcccgagatttttgccgccatccag
gcagaaaatgcgcgccaggaacagcacatcgagctgatcgccagcgaaaactacgcctcg
cccgccgtcatggccgcgcagggtacgcagctgaccaacaagtacgccgaaggctacccc
ggccggcgctactacggcggctgcgaacacgtggacgtggcagaacagctcgccatcgat
cgagtcaagcagatttttggcgccgacgctgccaacgtgcagccccattgcggcgcatcg
gccaacgaagccgtgttcctggccttcctgaaacccggcgacaccatcatgggcatgagc
ctggccgaaggcggtcacctcacccacggcatgcccctcaacatgagcggcaagtggttc
aatgtcgtcagctatggcctcgatgcgaacgaagccattgactacgacgcgatggagcgc
aaggcccacgaatccaaacccaagctcatcatcgccggcgcttcggcctacagcctgcgc
atcgacttcgaacgctttgcgaaggtggccaaagacgtgggcgcgatcttcatggtcgac
atggcgcactacgccggcctgattgccgctggcgtgtatcccaaccccgtgccccacgcc
gatgtggtgacctccaccacccacaagagcctgcgcggccctcgcggcggcatcatcctg
atgaaggcccagtttgaaaaagccatcaacagcgcgatcttccccggcctgcagggcggc
cccctgatgcatgtgatcgcagccaaggccgtggccttcaaggaggcgctcgcccctgaa
ttcaaggtctaccaggcccaggtgttgaaaaatgcccagatcgtcgctgaaaccctgacc
gagcgcggtctgcgcatcgtcagcggccgcaccgagagccaccttatgctcgtcgacctg
cgctccaaaggcatcaccggcaaggaagccgaggccgtgctgggcagcgcccacatgacc
atcaacaaaaacgcgatccccaacgaccccgaaaagcccatggtcaccagcggcgtgcgc
atcggcacccccgccatgaccactcgcggcttcaaggacgaagaggcccgagcaacagcc
cacctgatcgctgacgtgctggacaacccgcgcgatgcggccaacatcgaaacggtgcga
gccaaggtcaacgccctgaccgcgcgcttccctgtctacaaataa
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