Hydrogenophaga sp. PAMC20947: E5678_02970
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Entry
E5678_02970 CDS
T05960
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K18302
membrane fusion protein, multidrug efflux system
Organism
hyc
Hydrogenophaga sp. PAMC20947
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hyc02000
]
E5678_02970
01504 Antimicrobial resistance genes [BR:
hyc01504
]
E5678_02970
Transporters [BR:
hyc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
E5678_02970
Antimicrobial resistance genes [BR:
hyc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
E5678_02970
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
DUF2254
CusF_Ec
SOR_N
Motif
Other DBs
NCBI-ProteinID:
QCB45083
UniProt:
A0A4V1CHD3
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All DBs
Position
645173..646279
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AA seq
368 aa
AA seq
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MHFTPLVLSAVVALSMAGCSRPEAPPEPIRSVKLITVTASGVTARQELSGEVRARTESRL
GFRVGGKLIERPAEVGQMVKAGQLLARLDATDLRLASQAAQAQVTAAQSQRDLAAADLKR
FTDLKAQGFVSGAEIERRQATLQAADATLQQARAQGSVQGHQADYTRLLADAAGVVVSVD
AEAGQVVAAGSPVVRIARDGARDVVFSIPESDLALIKPGLQAQVRLWANTAQGLDTPLLG
EVREVAASADPVTRTFQVKLALPVDAVAPLGATAYVVLPPASGDAPVVIKLPTSALMSAN
AVDKKSSAVWVFDVATSTVQSRPVQVGGADGNQMVILSGLKPGDEVVVAGVHVLSPGQHV
IRFAAAAR
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcatttcactcctctggtcctgtctgccgttgtagcgctttcgatggcagggtgctcc
cgccccgaggcacctcccgagcccatccgatcggtcaaactgatcacggtaaccgccagc
ggcgtgaccgcccgccaggagctttccggcgaagtgcgtgcccgtaccgagtcgcgattg
ggcttccgggtgggtggaaaactcattgaacggccagcggaagtggggcaaatggtgaaa
gcgggtcagctgctcgcccgcctcgatgccaccgacctcaggctggccagtcaggctgct
caagcccaagtgactgcggcccagtcgcagcgcgacctggctgcggccgacctcaagcgt
ttcacggatctcaaggcccagggctttgtcagtggtgccgagatcgagcgccgccaagcc
acattgcaagccgctgacgcgacattgcagcaggcgcgggcccaagggtctgtgcagggc
caccaggcagactacacccgtttgctggccgatgccgccggggtggtggtgtcggtggac
gctgaggcgggccaagtggtggccgctggaagtcccgtggtccggatcgcacgcgacggt
gcgcgcgatgtggtgttctcaataccggagagcgatctggcgctgatcaagcctgggctg
caagcccaggtgcgcctgtgggccaatacagctcaggggctggacacgccgttgctcggg
gaggtgcgggaagttgccgccagcgcggatcccgtcacccggactttccaggtcaagctg
gcgctgcccgtggatgcggtcgcacccttgggtgccacagcctatgtggtgttgccgccc
gcatcgggtgacgcacccgtggtgatcaagctgcccaccagtgccctgatgtccgcgaat
gcggttgacaagaagagctcggcggtctgggtgtttgatgtggccaccagcaccgtacag
tcaagaccggtgcaagtcggcggtgccgatggcaatcagatggtcattctctcgggcttg
aagcccggtgacgaagtggtggtggccggggtgcatgtgctgtcccccggtcagcacgtg
atccgcttcgctgccgctgcgcgctga
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