Hydrogenophaga sp. PAMC20947: E5678_03655
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Entry
E5678_03655 CDS
T05960
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hyc
Hydrogenophaga sp. PAMC20947
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hyc03009
]
E5678_03655 (rimO)
Enzymes [BR:
hyc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
E5678_03655 (rimO)
Ribosome biogenesis [BR:
hyc03009
]
Prokaryotic type
ribosomal protein modification factors
E5678_03655 (rimO)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
YajR_YAM
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
QCB45202
UniProt:
A0A4P7R8E6
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All DBs
Position
793628..795013
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AA seq
461 aa
AA seq
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MNQSVVVPGAPAPKVGFVSLGCPKALTDSELILTQLSAEGYQTSKTFAGADLVIVNTCGF
IDDAVRESLDAIGEALAENGKVIVTGCLGAREGEGGGNMVRNIHPSVLAVTGPHATHEVM
EAVHTHLPKPHDPFVDLVPPQGIKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPI
GDVLTEARKLFESGVKELLVVSQDTSAYGVDVKYRTGFWDGRPVKTRMLDLVQSLGEIAK
GFGAWVRLHYVYPYPHVDDVIPLMAEGLCLPYLDVPLQHSHPEVLRRMKRPASGERNLER
IARWRELCPEIVVRSTFIAGFPGETEAEFQHLLDFVQEARIDRAGCFAYSPVNGAAANAL
ADPVPAELREERRARFMAVAEAVSVDKLRERVGATMQVLVDAAPGMGKKGGVGRSYADAP
EIDGVVRLLPPEKISKTLKVGEFTKARIVAAEGHDLLAVPF
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaatccgttgttgtcccgggcgcccccgcgcccaaagtcgggtttgtgagcctg
ggctgtcccaaggccctgaccgactccgaacttatcctcacgcaactcagcgcagagggc
tatcaaacttcgaaaaccttcgccggtgccgatctggtaatcgtcaacacctgtggcttc
attgacgatgccgtcagggaaagcctggatgccattggtgaggcgctcgccgaaaacggc
aaagtgatcgtcacgggttgcctcggcgctcgcgaaggcgaaggcggtggcaacatggtg
cgcaacattcaccccagcgtgctggcggtgaccgggccccatgccacccatgaggtcatg
gaggcggtgcacacccatctgcccaaaccccatgacccctttgttgatctggtgcctccg
cagggcataaagctcaccccccgccactacgcgtatctgaagatcagcgaaggttgcaac
caccgttgcaccttttgcatcatcccttccatgcgcggtgatctggtgagcaggccgata
ggcgatgtgctgacagaggcgcgcaaactgtttgagtcgggtgtgaaagagttgctggtg
gtgagccaggacacctccgcctacggcgtggatgtcaaataccgaacaggtttttgggat
ggcaggccagtcaaaacgcgcatgctggatctggtgcagtctttgggtgaaattgccaaa
gggtttggcgcctgggtgaggctgcactacgtgtatccctatccccatgtggacgatgtg
atcccgttgatggccgaaggtttgtgcctgccttacctggatgtgccgctgcaacacagc
catcctgaagtgctccgccggatgaaacgtcccgccagtggtgagcgcaatcttgagcgc
atcgcccgttggcgtgagctgtgccctgaaatcgtggtgcgcagcacctttatcgccggg
ttcccgggcgagaccgaggccgagtttcagcatttgctcgattttgttcaggaggcccgc
attgatcgcgccggatgctttgcatattcgcctgtcaatggcgcggcggccaatgcgttg
gccgatccggtgcctgccgagttgcgcgaagagcgcagggcgcgcttcatggctgttgcg
gaggctgtgtcggttgacaagttgcgtgagcgcgtgggtgcgaccatgcaagtgctagtg
gacgctgcgccaggcatgggcaaaaagggaggggtggggcgcagttacgccgatgctccc
gagatcgacggcgtggtgaggctgttgccacccgagaagatcagcaagacgctgaaggtg
ggtgagttcaccaaggcgcgtattgtcgcggccgaaggtcacgatttgctggcagttcca
ttttga
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