Hydrogenophaga sp. PAMC20947: E5678_03780
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Entry
E5678_03780 CDS
T05960
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
hyc
Hydrogenophaga sp. PAMC20947
Pathway
hyc00220
Arginine biosynthesis
hyc00240
Pyrimidine metabolism
hyc00250
Alanine, aspartate and glutamate metabolism
hyc01100
Metabolic pathways
hyc01110
Biosynthesis of secondary metabolites
hyc01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
E5678_03780 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
E5678_03780 (carB)
00220 Arginine biosynthesis
E5678_03780 (carB)
Enzymes [BR:
hyc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
E5678_03780 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_4
ATPgrasp_Ter
ATP-grasp_3
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
QCB45224
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Position
818628..821915
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AA seq
1095 aa
AA seq
DB search
MAKRTDIHTVLIIGAGPIIIGQACEFDYSGVQACKALREEGYRVVLINSNPATIMTDPAT
ADVTYIEPITWQTVEKIIAKERPSCTGGFAILPTMGGQTALNCALDLWHNGVLEKYQVEL
IGATPEAIDKAEDRLKFKEAMTKIGLGSARSGIAHTMDEAWAVQKTLGFPTVVRPSFTLG
GTGGGIAYNPEEFETICKRGLEASPTNELLIEESLLGWKEYEMEVVRDKADNCIIVCSIE
NLDPMGVHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVDTGGSNVQFSINPKDGRM
VVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGATPASFEPSIDYV
VTKIPRFAFEKFPTADSRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDGMNEKTQD
REILERELGTPGPDRIWYVGDAFAAGWSLDEVHHFTKIDLWFLVQIEEIVKIELALEQTT
LEALDAETLRGLKKKGFSDRRLAKQLKTTDKAVRERRIAENIRPVYKRVDTCAAEFATDT
AYLYSTYEGHGDGECEAEPTNNKKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETI
MVNCNPETVSTDFDTSDRLYFEPLTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALDLEAA
GVPIIGTSPDMIDAAEDRERFQKLLNDLGLRQPPNATARTEAAALEKAAALGYPLVVRPS
YVLGGRAMEIVHEQRDLERYMREAVKVSHDSPVLLDRFLNDAIECDVDAIRDASGRVFIG
GVMEHIEQAGVHSGDSACSLPPYYLSKETVDELKRQTAAMAEGLNVVGLMNVQFAIQEVD
AEGAKKDVIFVLEVNPRASRTVPFVSKATGIQLAKVAARCMAGQTLDSQGIGAEVTPPYF
SVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQLGAGTQLPRAKKADGS
PSGKVFLTVKNSDKPRAVEIARQLVAMGFELVATRGTAAAIAAAGVAVDTVNKVTEGRPH
IVDMIKSDGIVLVINTVEERRNAIADSGAIRTSALLARVTTYTTIAGAEAAVEGMAYMDS
LGVISVQEMHAQLTA
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaagaacagatatccacaccgtcctcatcatcggcgcaggccccatcatcatt
ggccaagcgtgcgaatttgactactcgggcgttcaggcctgcaaagccttgcgggaagag
ggttaccgcgtggtgctgatcaacagcaaccccgcaaccatcatgaccgatccggccacg
gccgacgtgacctatatcgagcccatcacctggcagacggttgaaaaaatcattgccaag
gagcgcccaagctgcacgggcggctttgccattttgccgaccatgggcggtcagaccgcg
ctcaattgcgcgctcgatctttggcacaacggcgtgcttgaaaagtaccaggtcgagctg
atcggtgcgacgcctgaggcgattgacaaggccgaagatcgactgaagttcaaggaggcc
atgaccaaaattggtctgggttctgcccgttccggaattgctcacaccatggacgaagcc
tgggccgtgcagaagacgttgggctttccgacggtcgttcgccccagcttcacgctgggc
ggcaccggcggcggtatcgcctacaacccggaagagttcgagaccatctgcaaacgcggc
ctggaggcttcgccgaccaacgagctgctgatcgaagaatcgctgctgggttggaaagag
tacgagatggaggtggtgcgcgacaaggcggacaactgcatcatcgtttgttcgattgaa
aacctggaccccatgggcgtgcacaccggtgactccatcacagtggcgcccgcccagacg
ctgaccgacaaggaataccagattctgcgcaatgcgtctctcgctgtgctgcgcgagatc
ggtgtggacaccggtggatccaatgtgcagttctcgatcaacccgaaagacggccgcatg
gtcgtgatcgagatgaatccgcgtgtgtcgcgttcgtcggccctcgcatccaaggcgacc
ggtttcccgatcgccaaggtggcggccaaactggccgtgggttatacgctggacgagctg
cgcaacgagatcaccgggggtgccacgcccgccagcttcgagcccagcatcgattacgtg
gtcaccaagatcccgcgttttgcttttgaaaaattccccacggccgacagccgcctgacc
acgcaaatgaagagtgtgggtgaagtcatggccatgggccgtaccttccaggagtcgttc
cagaaagccttgcgtggcctggaagtcggcgtggacggcatgaatgaaaaaacccaggac
cgtgagatcctggagcgcgagctgggcacacccggcccggaccgaatctggtacgtgggc
gacgcgtttgccgctggctggtcgctcgacgaagtgcaccatttcaccaagatcgatctg
tggttcctggtgcagatcgaagagattgtgaagatcgagctggcgttggaacaaaccact
ctggaagcgctggacgctgagacattgcgcgggctgaagaagaaagggttctcggatcgc
cgtttggccaaacaactcaagaccaccgacaaagcggttcgcgagcgtcgcatcgccgag
aacatccggccggtgtacaagcgcgtggacacctgcgctgccgagttcgccaccgacaca
gcctacctgtactcgacctacgaaggacatggcgatggtgagtgcgaagccgagccgacc
aacaacaagaaaatcatggtactgggtggtggccccaaccgcatcggacagggcatcgaa
ttcgactactgctgtgtgcatgccgctctcgccctccgcgaagacggctatgaaaccatc
atggtcaactgcaaccctgaaaccgtgtccaccgatttcgacaccagcgatcgcctctac
tttgagccgctgacgctggaggacgtgctggagattgtggacaaggagaaaccagtaggt
gtgatcgttcaatacggtggtcagacgcctttgaagctggcgttggacctggaggccgca
ggcgtgcccatcatcggcaccagccccgacatgattgacgcggcggaagaccgcgagcgt
ttccagaaactgttgaatgatctgggtttgcgccagccacccaacgccaccgcgcgcacc
gaagcggctgcgctggagaaggccgccgccttgggttatcccttggtggtgcgccccagc
tatgtgctgggtggtcgtgcgatggaaatcgtgcacgagcagcgcgatctcgagcgctac
atgcgcgaagcggtcaaggtcagccacgattcgccggttttgctggaccgattcctgaac
gatgccatcgaatgcgatgtagatgccatacgcgatgcctcaggccgtgtgttcattggt
ggcgtgatggaacacattgagcaggcgggcgtgcacagtggcgattcggcttgttcgttg
ccaccgtactacctgtccaaggaaaccgtcgacgagctcaagcgccagacggccgccatg
gccgaaggcctgaatgtggttggattgatgaatgtacagttcgccattcaggaagtggat
gctgaaggggccaagaaggatgtgatcttcgtgctggaggtgaacccccgtgcgtcgcga
actgttccgtttgtgtccaaggccaccggcattcagctggccaaggtcgcagcacgttgc
atggcaggtcagaccctggacagccaaggcattggcgccgaagtgacgccgccctatttc
agcgtcaaggaagccgtgttcccattcgtgaagttcccgggcgtggacacgattcttggc
ccggagatgaagtcgactggcgaagtcatgggcgtgggcaagacctttggtgaggcgttt
gtaaaaagccagctgggcgccggcacgcagctgccacgtgccaagaaagccgatggctcg
ccttcaggcaaggtgttcctcacggttaaaaacagcgacaaaccacgcgccgtagagatt
gcgcgccaactggtggccatggggtttgagctggtcgcgacccgtggcaccgcggcggcc
attgcggcggcaggggtggccgtcgacacggtgaacaaggtgaccgaaggccgcccgcac
atcgtcgacatgatcaagagcgatggcatcgttttggtgatcaacacggtggaagagcgc
cgaaacgcgatcgcggattcgggtgcgattcgcacttcagcgctgctggcccgtgtaacc
acctacaccaccattgccggcgctgaggccgcggtggagggcatggcctacatggacagc
ctgggtgtcatttccgtgcaggaaatgcacgcccaactgaccgcctga
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