KEGG   Hydrogenophaga sp. PAMC20947: E5678_03900
Entry
E5678_03900       CDS       T05960                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
hyc  Hydrogenophaga sp. PAMC20947
Pathway
hyc00010  Glycolysis / Gluconeogenesis
hyc00020  Citrate cycle (TCA cycle)
hyc00260  Glycine, serine and threonine metabolism
hyc00280  Valine, leucine and isoleucine degradation
hyc00310  Lysine degradation
hyc00380  Tryptophan metabolism
hyc00620  Pyruvate metabolism
hyc00630  Glyoxylate and dicarboxylate metabolism
hyc00640  Propanoate metabolism
hyc00670  One carbon pool by folate
hyc00785  Lipoic acid metabolism
hyc01100  Metabolic pathways
hyc01110  Biosynthesis of secondary metabolites
hyc01120  Microbial metabolism in diverse environments
hyc01200  Carbon metabolism
hyc01210  2-Oxocarboxylic acid metabolism
hyc01240  Biosynthesis of cofactors
Module
hyc_M00009  Citrate cycle (TCA cycle, Krebs cycle)
hyc_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
hyc_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
hyc_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
hyc_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:hyc00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    E5678_03900 (lpdA)
   00020 Citrate cycle (TCA cycle)
    E5678_03900 (lpdA)
   00620 Pyruvate metabolism
    E5678_03900 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    E5678_03900 (lpdA)
   00640 Propanoate metabolism
    E5678_03900 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    E5678_03900 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    E5678_03900 (lpdA)
   00310 Lysine degradation
    E5678_03900 (lpdA)
   00380 Tryptophan metabolism
    E5678_03900 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    E5678_03900 (lpdA)
   00670 One carbon pool by folate
    E5678_03900 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hyc04147]
    E5678_03900 (lpdA)
Enzymes [BR:hyc01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     E5678_03900 (lpdA)
Exosome [BR:hyc04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   E5678_03900 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox HI0933_like Pyr_redox_3 FAD_oxidored FAD_binding_2 AlaDh_PNT_C GIDA NAD_binding_8 3HCDH_N Thi4 FAD_binding_3 2-Hacid_dh_C DAO Amino_oxidase Lycopene_cycl
Other DBs
NCBI-ProteinID: QCB45245
LinkDB
Position
854950..856377
AA seq 475 aa
MSQAFDVVVIGAGPGGYIAAIRAAQLGFKVACIDEWKNAAGGPAPGGTCTNVGCIPSKAL
LQSSEHFDHANHHFAEHGISTGTVKMDVAKMLGRKDTVVKQNNDGILYLFKKNKITFFHG
RGSFAQANAEGYDILVKGDKEETIKATQVIVATGSNARALPGADFDETQILSNDGALRIG
AVPKKLGLIGAGVIGLEMGSVWRRLGAEVTVLEGLPTFLGAVDQQIAKEAKKAFDKQGLK
IEMGVKVGEIKTTKKGVNVAYTTAKGEEVSLDVDKLIVSIGRVPNTSGLNAEAVKLKLDD
RGAVVVDDECRTNLKGVWAVGDVVRGPMLAHKAEEEGVAVAERIAGQHGHVNFNTIPWVI
YTHPEIAWVGRTEEQLKADGVAYKAGTFPFLANGRARALGDTTGMVKFLADATTDEILGV
HIVGPMASELISEAVVAMEFKASAEDIARICHAHPSLSEATKEAALAVDKRTLNF
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgtctcaagcatttgacgtcgtcgtgatcggcgcaggccccggcggatacatcgccgcc
attcgtgccgcccagctgggcttcaaggttgcgtgtattgacgagtggaagaacgccgct
ggtggccctgcacccggcggtacctgcaccaacgtgggttgtatcccatccaaggcgctg
ttgcagtcctctgagcacttcgaccacgccaaccaccactttgccgaacatggcatcagc
accggcaccgtcaagatggacgtggccaagatgctgggccgcaaagacaccgtggtgaag
cagaacaacgacggcatcctgtatctgttcaagaaaaacaagatcaccttcttccatggc
cgtggctcatttgcccaggccaacgccgagggttatgacattctggtcaagggcgacaaa
gaagaaaccatcaaggccacgcaggtgatcgtggccacgggatccaacgcccgtgctttg
ccaggtgcagacttcgatgaaacgcagattctgtcgaacgatggcgcgctgcgcattggc
gccgtgcccaagaagctgggcctgattggcgctggcgtgatcggtctggagatgggctcg
gtgtggcgccgtctgggcgcagaagtgaccgtgctcgaaggcctgcccacattcctgggt
gccgtggaccagcagatcgcgaaagaggccaaaaaggccttcgacaagcaaggtctgaag
atcgaaatgggcgtcaaggtgggtgaaatcaagaccaccaaaaaaggcgtcaacgtcgcc
tacaccaccgccaaaggcgaagaggtgtcgctcgatgtggacaagctcatcgtctccatt
ggccgtgtgcccaacacgagcggtttgaacgccgaagcggtcaaactcaaactcgatgac
cgtggggctgttgttgtggacgacgaatgccgcaccaacctcaagggcgtctgggcggtc
ggcgatgtggttcgcggccccatgctggcacacaaggctgaggaagagggcgtggctgtg
gccgagcgtatcgcgggccaacacggccatgtgaacttcaacaccatcccctgggtgatc
tatacccaccccgagatcgcttgggtgggccgcacggaagagcagctcaaagccgatggt
gtggcctacaaggcgggcacgttccctttcctcgccaacggccgggcgcgcgccctgggc
gacacaaccggcatggtcaagttcctggctgacgccaccaccgacgagatcctgggggtg
cacatcgtcggccccatggcatccgaattgatctccgaagccgtggtggcgatggagttc
aaggccagcgctgaagacatcgcgcgcatttgccacgcccacccttctttgtcggaagcg
acgaaagaggctgctttggcagtggacaagcgcacgctcaacttttga

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