Hydrogenophaga sp. PAMC20947: E5678_03900
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Entry
E5678_03900 CDS
T05960
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
hyc
Hydrogenophaga sp. PAMC20947
Pathway
hyc00010
Glycolysis / Gluconeogenesis
hyc00020
Citrate cycle (TCA cycle)
hyc00260
Glycine, serine and threonine metabolism
hyc00280
Valine, leucine and isoleucine degradation
hyc00310
Lysine degradation
hyc00380
Tryptophan metabolism
hyc00620
Pyruvate metabolism
hyc00630
Glyoxylate and dicarboxylate metabolism
hyc00640
Propanoate metabolism
hyc00670
One carbon pool by folate
hyc00785
Lipoic acid metabolism
hyc01100
Metabolic pathways
hyc01110
Biosynthesis of secondary metabolites
hyc01120
Microbial metabolism in diverse environments
hyc01200
Carbon metabolism
hyc01210
2-Oxocarboxylic acid metabolism
hyc01240
Biosynthesis of cofactors
Module
hyc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
hyc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
hyc_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
hyc_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
hyc_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
E5678_03900 (lpdA)
00020 Citrate cycle (TCA cycle)
E5678_03900 (lpdA)
00620 Pyruvate metabolism
E5678_03900 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
E5678_03900 (lpdA)
00640 Propanoate metabolism
E5678_03900 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
E5678_03900 (lpdA)
00280 Valine, leucine and isoleucine degradation
E5678_03900 (lpdA)
00310 Lysine degradation
E5678_03900 (lpdA)
00380 Tryptophan metabolism
E5678_03900 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
E5678_03900 (lpdA)
00670 One carbon pool by folate
E5678_03900 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hyc04147
]
E5678_03900 (lpdA)
Enzymes [BR:
hyc01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
E5678_03900 (lpdA)
Exosome [BR:
hyc04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
E5678_03900 (lpdA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
HI0933_like
Pyr_redox_3
FAD_oxidored
FAD_binding_2
AlaDh_PNT_C
GIDA
NAD_binding_8
3HCDH_N
Thi4
FAD_binding_3
2-Hacid_dh_C
DAO
Amino_oxidase
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
QCB45245
LinkDB
All DBs
Position
854950..856377
Genome browser
AA seq
475 aa
AA seq
DB search
MSQAFDVVVIGAGPGGYIAAIRAAQLGFKVACIDEWKNAAGGPAPGGTCTNVGCIPSKAL
LQSSEHFDHANHHFAEHGISTGTVKMDVAKMLGRKDTVVKQNNDGILYLFKKNKITFFHG
RGSFAQANAEGYDILVKGDKEETIKATQVIVATGSNARALPGADFDETQILSNDGALRIG
AVPKKLGLIGAGVIGLEMGSVWRRLGAEVTVLEGLPTFLGAVDQQIAKEAKKAFDKQGLK
IEMGVKVGEIKTTKKGVNVAYTTAKGEEVSLDVDKLIVSIGRVPNTSGLNAEAVKLKLDD
RGAVVVDDECRTNLKGVWAVGDVVRGPMLAHKAEEEGVAVAERIAGQHGHVNFNTIPWVI
YTHPEIAWVGRTEEQLKADGVAYKAGTFPFLANGRARALGDTTGMVKFLADATTDEILGV
HIVGPMASELISEAVVAMEFKASAEDIARICHAHPSLSEATKEAALAVDKRTLNF
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagcatttgacgtcgtcgtgatcggcgcaggccccggcggatacatcgccgcc
attcgtgccgcccagctgggcttcaaggttgcgtgtattgacgagtggaagaacgccgct
ggtggccctgcacccggcggtacctgcaccaacgtgggttgtatcccatccaaggcgctg
ttgcagtcctctgagcacttcgaccacgccaaccaccactttgccgaacatggcatcagc
accggcaccgtcaagatggacgtggccaagatgctgggccgcaaagacaccgtggtgaag
cagaacaacgacggcatcctgtatctgttcaagaaaaacaagatcaccttcttccatggc
cgtggctcatttgcccaggccaacgccgagggttatgacattctggtcaagggcgacaaa
gaagaaaccatcaaggccacgcaggtgatcgtggccacgggatccaacgcccgtgctttg
ccaggtgcagacttcgatgaaacgcagattctgtcgaacgatggcgcgctgcgcattggc
gccgtgcccaagaagctgggcctgattggcgctggcgtgatcggtctggagatgggctcg
gtgtggcgccgtctgggcgcagaagtgaccgtgctcgaaggcctgcccacattcctgggt
gccgtggaccagcagatcgcgaaagaggccaaaaaggccttcgacaagcaaggtctgaag
atcgaaatgggcgtcaaggtgggtgaaatcaagaccaccaaaaaaggcgtcaacgtcgcc
tacaccaccgccaaaggcgaagaggtgtcgctcgatgtggacaagctcatcgtctccatt
ggccgtgtgcccaacacgagcggtttgaacgccgaagcggtcaaactcaaactcgatgac
cgtggggctgttgttgtggacgacgaatgccgcaccaacctcaagggcgtctgggcggtc
ggcgatgtggttcgcggccccatgctggcacacaaggctgaggaagagggcgtggctgtg
gccgagcgtatcgcgggccaacacggccatgtgaacttcaacaccatcccctgggtgatc
tatacccaccccgagatcgcttgggtgggccgcacggaagagcagctcaaagccgatggt
gtggcctacaaggcgggcacgttccctttcctcgccaacggccgggcgcgcgccctgggc
gacacaaccggcatggtcaagttcctggctgacgccaccaccgacgagatcctgggggtg
cacatcgtcggccccatggcatccgaattgatctccgaagccgtggtggcgatggagttc
aaggccagcgctgaagacatcgcgcgcatttgccacgcccacccttctttgtcggaagcg
acgaaagaggctgctttggcagtggacaagcgcacgctcaacttttga
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